RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 OR10H5Q8NGA6 315 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 OR51A7Q8NH64 312 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 SIGLEC7Q9Y286 467 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 CAB39Q9Y376 341 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 SPEF1Q9Y4P9 236 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 FKBP7Q9Y680 259 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 NIPBLQ6KC79 2804 aaeCLIP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 PRR23D1E9PI22 279 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SERPINA5P05154 406 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 PRR23D2P0DMB1 279 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 FXYD6P3P58550 94 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 MRPS34P82930 218 aaKnown RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 MXD1Q05195 221 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 HNRNPA0Q13151 305 aaKnown RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 CD200R1LQ6Q8B3 271 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SLC16A14Q7RTX9 510 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 AP3S1Q92572 193 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 TPK1Q9H3S4 243 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 C1orf198Q9H425 327 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 RTTNQ86VV8 2226 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 A6NIZ1 184 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SLC22A31A6NKX4 558 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 APOA1P02647 267 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 HLA-DPB1P04440 258 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SLC6A6P31641 620 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 RAP1BP61224 184 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 RAP1AP62834 184 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 BDH1Q02338 343 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 OR51G2Q8NGK0 314 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF519Q8TB69 540 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-203ENST00000468565 HTRA1Q92743 480 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 TSPAN32Q96QS1 320 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 NDEL1Q9GZM8 345 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 RERGLQ9H628 205 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 INPP5EQ9NRR6 644 aa12.47□□□□□ -0.41
COL27A1-203ENST00000468565 FN1P02751 2386 aaKnown RBP12.46□□□□□ -0.41
COL27A1-203ENST00000468565 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 PTP4A3O75365 173 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 IFNGP01579 166 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 PATE4P0C8F1 98 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 GAAP10253 952 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 SLC25A16P16260 332 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF3P17036 446 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 GLRXP35754 106 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 ARPC4P59998 168 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 RPS23P62266 143 aaKnown RBP12.46□□□□□ -0.42
COL27A1-203ENST00000468565 GALK2Q01415 458 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 FABP5Q01469 135 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 KRTAP21-3Q3LHN1 58 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF525Q8N782 197 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 FAM168AQ92567 244 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 RBP7Q96R05 134 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 ARPC5LQ9BPX5 153 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 RNF121Q9H920 327 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 MYOZ1Q9NP98 299 aaPredicted RBP12.46□□□□□ -0.42
COL27A1-203ENST00000468565 NAV3Q8IVL0 2385 aa12.46□□□□□ -0.42
COL27A1-203ENST00000468565 IGKV1D-43A0A0B4J1Z2 117 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 J3QRE1 110 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 GALP22466 123 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 SDC2P34741 201 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 EVX1P49640 407 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 FMODQ06828 376 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 GPR50Q13585 617 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 CADM3Q8N126 398 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 OR8H2Q8N162 312 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 ARIH2OSQ8N7S6 290 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 MRPL24Q96A35 216 aaKnown RBP12.45□□□□□ -0.42
COL27A1-203ENST00000468565 NABP1Q96AH0 204 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF649Q9BS31 505 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 KCNN2Q9H2S1 579 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 MED20Q9H944 212 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 A0A096LNT2 108 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 DAPL1A0PJW8 107 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 SLC22A23A1A5C7 686 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 C12orf71A8MTZ7 269 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 CD14P08571 375 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 MMP7P09237 267 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-203ENST00000468565 CLEC2LP0C7M8 214 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms