RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CELP19835 753 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 MTNR1BP49286 362 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ECH1Q13011 328 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 RIN1Q13671 783 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 EIF2B1Q14232 305 aaKnown RBP12.83□□□□□ -0.36
DDX56-208ENST00000467318 KCNJ8Q15842 424 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ELFN2Q5R3F8 820 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
DDX56-208ENST00000467318 ACBD4Q8NC06 268 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ST7LQ8TDW4 575 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ASB17Q8WXJ9 295 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ZC3HAV1LQ96H79 300 aaKnown RBP12.83□□□□□ -0.36
DDX56-208ENST00000467318 MAP6Q96JE9 813 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ABHD6Q9BV23 337 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 ZNF221Q9UK13 617 aa12.83□□□□□ -0.36
DDX56-208ENST00000467318 UTP20O75691 2785 aaKnown RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 PRR14LQ5THK1 2151 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 HMX3A6NHT5 357 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 DOK2O60496 412 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 APOL3O95236 402 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 MT-ND5P03915 603 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 PSKH1P11801 424 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 ZNF14P17017 642 aaPredicted RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 GALEQ14376 348 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 RAB35Q15286 201 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 BAK1Q16611 211 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 CCDC92Q53HC0 331 aaPredicted RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 NRARPQ7Z6K4 114 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 C19orf18Q8NEA5 215 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 OR10H4Q8NGA5 316 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 FAM222BQ8WU58 562 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
DDX56-208ENST00000467318 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 SOSTQ9BQB4 213 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 WNT5BQ9H1J7 359 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 NOX3Q9HBY0 568 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
DDX56-208ENST00000467318 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 ZNF878C9JN71 531 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 SYNGR3O43761 229 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 HCCSP53701 268 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 EGR3Q06889 387 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 ZNF774Q6NX45 483 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 DEGS2Q6QHC5 323 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 SEZ6L2Q6UXD5 910 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 WFDC8Q8IUA0 241 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 CELF2-AS1Q8N7Q2 184 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 CPEB3Q8NE35 698 aaKnown RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 AKR7LQ8NHP1 331 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 SMAP2Q8WU79 429 aaPredicted RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 RNF133Q8WVZ7 376 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 MRPL48Q96GC5 212 aaKnown RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 ATF6BQ99941 703 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 TMED9Q9BVK6 235 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 C1QTNF6Q9BXI9 259 aa12.81□□□□□ -0.36
DDX56-208ENST00000467318 PNRC2Q9NPJ4 139 aaKnown RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 DDX28Q9NUL7 540 aaKnown RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
DDX56-208ENST00000467318 OR6C6A6NF89 314 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 CLDN1O95832 211 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 HLA-DQB1P01920 261 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 CSF3P09919 207 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 CRYGSP22914 178 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 PTAFRP25105 342 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 STOMP27105 288 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 APLNRP35414 380 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 RFX2P48378 723 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 EVX1P49640 407 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 ROM1Q03395 351 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 TRIQKQ629K1 86 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 PAMR1Q6UXH9 720 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 ZNF584Q8IVC4 421 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 RDH10Q8IZV5 341 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 OR1J2Q8NGS2 313 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 OR1F12Q8NHA8 337 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
DDX56-208ENST00000467318 CENPMQ9NSP4 180 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 CRIM1Q9NZV1 1036 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 COMMD3Q9UBI1 195 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 COPS3Q9UNS2 423 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 A1L4Q6 167 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 ZNF254O75437 659 aa12.8□□□□□ -0.36
DDX56-208ENST00000467318 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms