RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 A0A0U1RQV5 110 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 A6NNC1 897 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 CASKO14936 926 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 GPRIN2O60269 458 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 INMTO95050 263 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 PLAUP00749 431 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 LCATP04180 440 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 CD3EP07766 207 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 RPSAP08865 295 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 FAM157BP0CG42 384 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 ATP6V1B1P15313 513 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 JUNBP17275 347 aaPredicted RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 TAS2R43P59537 309 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 ERVS71-1P61550 626 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MLLT11Q13015 90 aaPredicted RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 SNTB2Q13425 540 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 TPBGQ13641 420 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MED22Q15528 200 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 GLYATL3Q5SZD4 288 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 BCL2L15Q5TBC7 163 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 ADAM5Q6NVV9 412 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 RPL22L1Q6P5R6 122 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 ARL9Q6T311 187 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 Q6ZSR3 168 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 ZFP41Q8N8Y5 198 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 LILRB1Q8NHL6 650 aaPredicted RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 ABHD4Q8TB40 342 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 TMEM171Q8WVE6 324 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 RGP1Q92546 391 aaPredicted RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 FCGR1BQ92637 280 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 SMIM19Q96E16 107 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 PIK3IP1Q96FE7 263 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MARS2Q96GW9 593 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 LYZL4Q96KX0 146 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 PGLYRP3Q96LB9 341 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MGLLQ99685 303 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 MRPS26Q9BYN8 205 aaKnown RBP9.59□□□□□ -0.87
VCP-204ENST00000466100 BCL2L14Q9BZR8 327 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 OR51B6Q9H340 312 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 BRD7Q9NPI1 651 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 RNF115Q9Y4L5 304 aa9.59□□□□□ -0.87
VCP-204ENST00000466100 A0A1B0GTI1 187 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 H3BSA7 217 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 PLPP2O43688 288 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 ZFPL1O95159 310 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 CD1AP06126 327 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 CCL1P22362 96 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 GLRXP35754 106 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 PPP1CBP62140 327 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 ZNF92Q03936 586 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 TNK1Q13470 666 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 NEDD8Q15843 81 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SSX1Q16384 188 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 TIGD6Q17RP2 521 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SPATA46Q5T0L3 261 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SYT6Q5T7P8 510 aaPredicted RBP9.58□□□□□ -0.88
VCP-204ENST00000466100 SP5Q6BEB4 398 aaPredicted RBP9.58□□□□□ -0.88
VCP-204ENST00000466100 SLC22A25Q6T423 547 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 FBXW12Q6X9E4 464 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 C1orf174Q8IYL3 243 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 PLPP7Q8NBV4 271 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 OR2AE1Q8NHA4 323 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SLC25A40Q8TBP6 338 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 NEUROG1Q92886 237 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SGK3Q96BR1 496 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 PGAM5Q96HS1 289 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 RADILQ96JH8 1075 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 KCNS3Q9BQ31 491 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SOX7Q9BT81 388 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 OR10A2Q9H208 303 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 ZNF442Q9H7R0 627 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 SP140LQ9H930 580 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 PTTG3PQ9NZH4 202 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 EIF3KQ9UBQ5 218 aaKnown RBP9.58□□□□□ -0.88
VCP-204ENST00000466100 ANKRD17O75179 2603 aaKnown RBP9.58□□□□□ -0.88
VCP-204ENST00000466100 DSCAMO60469 2012 aa9.58□□□□□ -0.88
VCP-204ENST00000466100 CHD3Q12873 2000 aaKnown RBP9.58□□□□□ -0.88
VCP-204ENST00000466100 TRBV2A0A0J9YWF9 115 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 hCG_38984A0A1B0GV85 526 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 TMEM212A6NML5 194 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 E7EQL1 145 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 TBX1O43435 398 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 XRCC2O43543 280 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 ISG15P05161 165 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 TFAP2AP05549 437 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 UBCP0CG48 685 aaKnown RBP9.57□□□□□ -0.88
VCP-204ENST00000466100 ZNF250P15622 560 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 CPEP16870 476 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 ACHEP22303 614 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 TUBG1P23258 451 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 COL8A1P27658 744 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 THBS4P35443 961 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 RAD52P43351 418 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 ALDH3B2P48448 385 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 RPS11P62280 158 aaKnown RBP eCLIP9.57□□□□□ -0.88
VCP-204ENST00000466100 GPR50Q13585 617 aa9.57□□□□□ -0.88
VCP-204ENST00000466100 GK2Q14410 553 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms