RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 H0YIV9 168 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 H0YJW9 148 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 H7C0C1 242 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 M0R3G1 203 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 PLPP1O14494 284 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 CASQ2O14958 399 aaPredicted RBP1.99□□□□□ -2.09
SMC4-205ENST00000465563 RDH16O75452 317 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 CCNKO75909 580 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 CD74P04233 296 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 OR8U9P0C7N5 309 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 PGA4P0DJD7 388 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 PGA3P0DJD8 388 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 PGA5P0DJD9 388 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 EIF2S2P20042 333 aaKnown RBP1.99□□□□□ -2.09
SMC4-205ENST00000465563 DTYMKP23919 212 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 HMOX2P30519 316 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 BMI1P35226 326 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 IFT88Q13099 833 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 RPEL1Q2QD12 228 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 TRMT5Q32P41 509 aaKnown RBP1.99□□□□□ -2.09
SMC4-205ENST00000465563 SMUG1Q53HV7 270 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 BEX5Q5H9J7 111 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 SAXO2Q658L1 398 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 OR11H7Q8NGC8 314 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 OR51E1Q8TCB6 317 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 GLYATL2Q8WU03 294 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 LRRC29Q8WV35 223 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 ZNF488Q96MN9 340 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 RNF5Q99942 180 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 CCNB1IP1Q9NPC3 277 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 AHSPQ9NZD4 102 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 COMMD3-BMI1R4GMX3 469 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 SCN4AP35499 1836 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 TSPAN11A1L157 253 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 GABRPO00591 440 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 NME4O00746 187 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 NVLO15381 856 aaKnown RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 NMT2O60551 498 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 SEMA3DO95025 777 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 HLA-DQA1P01909 254 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 IFNW1P05000 195 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 UBCP0CG48 685 aaKnown RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 GABRG2P18507 467 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 LOXP28300 417 aaPredicted RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 OPRK1P41145 380 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 CXCL12P48061 93 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 SLC11A1P49279 550 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 CLDN8P56748 225 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 RAD51Q06609 339 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 CDC20Q12834 499 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 RNASE13Q5GAN3 156 aaKnown RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 C12orf54Q6X4T0 127 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 MRPL55Q7Z7F7 128 aaKnown RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 CALHM1Q8IU99 346 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 WDFY1Q8IWB7 410 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 LGI3Q8N145 548 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 LRRC75AQ8NAA5 344 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 NECAP1Q8NC96 275 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 OR6Q1Q8NGQ2 317 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 BTN2A3PQ96KV6 586 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 JSRP1Q96MG2 331 aaPredicted RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 ZNF382Q96SR6 550 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 FGF23Q9GZV9 251 aaPredicted RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 MED4Q9NPJ6 270 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 C8orf17Q9NRJ1 99 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 MYEF2Q9P2K5 600 aaKnown RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 CAB39Q9Y376 341 aaPredicted RBP1.98□□□□□ -2.09
SMC4-205ENST00000465563 SAR1BQ9Y6B6 198 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 FBN3Q75N90 2809 aa1.98□□□□□ -2.09
SMC4-205ENST00000465563 BAZ2AQ9UIF9 1905 aaKnown RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 TTC41PQ6P2S7 1318 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 DYSFO75923 2080 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 NLRC5Q86WI3 1866 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 IGHV3-72A0A0B4J1Y9 119 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 GOLGA6L7A0A1B0GV03 622 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 LRRIQ4A6NIV6 560 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 ZNF99A8MXY4 864 aaPredicted RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 KRBOX1C9JBD0 128 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 GOLGA8TH3BQL2 631 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 CASC3O15234 703 aaKnown RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 CCNE2O96020 404 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 OR56A5P0C7T3 313 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 IL32P24001 234 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 CD70P32970 193 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 PFN2P35080 140 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 RFC3P40938 356 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 RBM34P42696 430 aaKnown RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 SLC1A2P43004 574 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 SERPINB8P50452 374 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 CDKN2DP55273 166 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 RPL23P62829 140 aaKnown RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 CRADDP78560 199 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 CDK5Q00535 292 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 ZNF816Q0VGE8 651 aaPredicted RBP1.97□□□□□ -2.09
SMC4-205ENST00000465563 DGCR6Q14129 220 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 TAF9Q16594 264 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 TCEAL5Q5H9L2 206 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 ADNP2Q6IQ32 1131 aa1.97□□□□□ -2.09
SMC4-205ENST00000465563 WDR82Q6UXN9 313 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms