RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 PIK3IP1Q96FE7 263 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 ZNF799Q96GE5 643 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 CENPNQ96H22 339 aaPredicted RBP3.04□□□□□ -1.92
USP25-207ENST00000464435 CPB2Q96IY4 423 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 SERPINB11Q96P15 392 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 P2RX4Q99571 388 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 SHPKQ9UHJ6 478 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 PRO0461Q9UI25 63 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 MRPS18BQ9Y676 258 aaKnown RBP3.04□□□□□ -1.92
USP25-207ENST00000464435 WSB1Q9Y6I7 421 aa3.04□□□□□ -1.92
USP25-207ENST00000464435 IGKV6D-21A0A0A0MT36 114 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 A0A1B0GW55 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 NKX2-6A6NCS4 301 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 C11orf94C9JXX5 98 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 H3BN98 237 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 SMLR1H3BR10 107 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 LAD1O00515 517 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ITGB1BP1O14713 200 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 KMOO15229 486 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 SNAI2O43623 268 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L2P0CJ85 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L3P0CJ86 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L5P0CJ88 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L6P0CJ89 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L7P0CJ90 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 CALM1P0DP23 149 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 CALM2P0DP24 149 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 CALM3P0DP25 149 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ZNF250P15622 560 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 PGAM1P18669 254 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 AK4P27144 223 aaPredicted RBP3.03□□□□□ -1.92
USP25-207ENST00000464435 S100A5P33763 92 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 P2RY2P41231 377 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 RBM34P42696 430 aaKnown RBP3.03□□□□□ -1.92
USP25-207ENST00000464435 RANBP1P43487 201 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 CSNK1DP48730 415 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 MADCAM1Q13477 382 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DMC1Q14565 340 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ZSCAN26Q16670 478 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 NDUFAF6Q330K2 333 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 TTLL9Q3SXZ7 439 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 PIGGQ5H8A4 983 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4L9Q6RFH8 374 aaPredicted RBP3.03□□□□□ -1.92
USP25-207ENST00000464435 SETD3Q86TU7 594 aaPredicted RBP3.03□□□□□ -1.92
USP25-207ENST00000464435 UNC93AQ86WB7 457 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 C12orf56Q8IXR9 622 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 MREGQ8N565 214 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ZFP41Q8N8Y5 198 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 OR51F2Q8NH61 342 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 EEF1AKMT3Q96AZ1 226 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ZFP3Q96NJ6 502 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 WFIKKN1Q96NZ8 548 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 TAAR1Q96RJ0 339 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ZNF251Q9BRH9 671 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 TIMM29Q9BSF4 260 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 COPS4Q9BT78 406 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 BEX2Q9BXY8 128 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 ANGPTL4Q9BY76 406 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 C1orf198Q9H425 327 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 KCNJ16Q9NPI9 418 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 NECAP2Q9NVZ3 263 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 EMC3Q9P0I2 261 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 DUX4Q9UBX2 424 aa3.03□□□□□ -1.92
USP25-207ENST00000464435 NXT1Q9UKK6 140 aaKnown RBP3.03□□□□□ -1.92
USP25-207ENST00000464435 PUS1Q9Y606 427 aaKnown RBP eCLIP3.03□□□□□ -1.92
USP25-207ENST00000464435 MROH7Q68CQ1 1323 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 A0A0A6YYH2 397 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 A6NJ64 397 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 HACD1B0YJ81 288 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 F8VZ95 297 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 XKRYO14609 159 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 LIN7AO14910 233 aaPredicted RBP3.02□□□□□ -1.93
USP25-207ENST00000464435 COCHO43405 550 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 CA11O75493 328 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 TDP2O95551 362 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 RD3LP0DJH9 198 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 MAS1LP35410 378 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 HAAOP46952 286 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 CSNK1A1P48729 337 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 DNASE1L1P49184 302 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 ZNF136P52737 540 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 SLC35B1P78383 322 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 TMEM255AQ5JRV8 349 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 DUPD1Q68J44 220 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 LINC00336Q6ZUF6 198 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 TMEM179Q6ZVK1 233 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 NCCRP1Q6ZVX7 275 aaPredicted RBP3.02□□□□□ -1.93
USP25-207ENST00000464435 C6orf120Q7Z4R8 191 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 CDKL3Q8IVW4 592 aaPredicted RBP3.02□□□□□ -1.93
USP25-207ENST00000464435 VKORC1L1Q8N0U8 176 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 FAM3DQ96BQ1 224 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 DNAJC1Q96KC8 554 aaKnown RBP3.02□□□□□ -1.93
USP25-207ENST00000464435 SERPINB12Q96P63 405 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 CIB1Q99828 191 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 FOXC2Q99958 501 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 SH3GL3Q99963 347 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 DCUN1D5Q9BTE7 237 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 SPZ1Q9BXG8 430 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 SRRQ9GZT4 340 aa3.02□□□□□ -1.93
USP25-207ENST00000464435 TMEM38AQ9H6F2 299 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms