RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 KIR2DS4P43632 304 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 YAP1P46937 504 aaKnown RBP11.88□□□□□ -0.51
SMC1A-204ENST00000463684 DBPQ10586 325 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-204ENST00000463684 POU4F2Q12837 409 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 RSPO1Q2MKA7 263 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-204ENST00000463684 CYBRD1Q53TN4 286 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 GPR139Q6DWJ6 353 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 ERICH5Q6P6B1 374 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 CORO6Q6QEF8 472 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 RRM2BQ7LG56 351 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 FAM122BQ7Z309 247 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 FAM90A1Q86YD7 464 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 CFHR4Q92496 578 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 DMRTB1Q96MA1 342 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 PITX2Q99697 317 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 NUAK2Q9H093 628 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-204ENST00000463684 KAAG1Q9UBP8 84 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 SIGLEC9Q9Y336 463 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 hCG_1807616A0A1W2PRN6 198 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 MEIOCA2RUB1 952 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 A6NLC8 198 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
SMC1A-204ENST00000463684 GRPP07492 148 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 CRABP1P29762 137 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 GPR4P46093 362 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 EFNB2P52799 333 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 SELENOWP63302 87 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 EMX1Q04741 257 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-204ENST00000463684 MZT1Q08AG7 82 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 ECH1Q13011 328 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 MEP1BQ16820 701 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 LRRC23Q53EV4 343 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-204ENST00000463684 RABL3Q5HYI8 236 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 DNM1P34Q6PK57 102 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 TMPRSS11FQ6ZWK6 438 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 CALHM3Q86XJ0 350 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 OR2T6Q8NHC8 308 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 ACOT11Q8WXI4 607 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-204ENST00000463684 TOR3AQ9H497 397 aa11.87□□□□□ -0.51
SMC1A-204ENST00000463684 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-204ENST00000463684 CD300LBA8K4G0 201 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 SOCS2O14508 198 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 CDC42EP2O14613 210 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 FCN3O75636 299 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 NDUFB2O95178 105 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-204ENST00000463684 KDELR2P33947 212 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 GGT2P36268 569 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 MDH1P40925 334 aaKnown RBP11.86□□□□□ -0.51
SMC1A-204ENST00000463684 TPTEP56180 551 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 MICBQ29980 383 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 TBPL2Q6SJ96 375 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 MBOAT2Q6ZWT7 520 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 NAA40Q86UY6 237 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 DTX3Q8N9I9 347 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 OR2AJ1Q8NGZ0 328 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 ITPKCQ96DU7 683 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 ATF6BQ99941 703 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 FAM234AQ9H0X4 552 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 C14orf119Q9NWQ9 140 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 RYR3Q15413 4870 aa11.86□□□□□ -0.51
SMC1A-204ENST00000463684 A0A087WUU8 490 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 GGT3PA6NGU5 568 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 H3BUX3 64 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 J3KTA2 159 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 IMPA2O14732 288 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 NDUFB3O43676 98 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 LHBP01229 141 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 VSIG10L2P0DP72 767 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 MUC1P15941 1255 aaPredicted RBP11.85□□□□□ -0.51
SMC1A-204ENST00000463684 SAA4P35542 130 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 PRB3Q04118 309 aaPredicted RBP11.85□□□□□ -0.51
SMC1A-204ENST00000463684 TRAP1Q12931 704 aaKnown RBP11.85□□□□□ -0.51
SMC1A-204ENST00000463684 NSUN5P1Q3KNT7 163 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 LYG1Q8N1E2 194 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 OR8J3Q8NGG0 315 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 PPP1R35Q8TAP8 253 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 TLCD1Q96CP7 247 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 CCL13Q99616 98 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 NRIP3Q9NQ35 241 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms