RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 HEATR1Q9H583 2144 aaKnown RBP12.38□□□□□ -0.43
COL6A1-202ENST00000463060 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
COL6A1-202ENST00000463060 PNMA8CA0A1B0GUJ8 204 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 SMPD2O60906 423 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 ANXA2P07355 339 aaKnown RBP12.37□□□□□ -0.43
COL6A1-202ENST00000463060 CD36P16671 472 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 NR4A1P22736 598 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 TTKP33981 857 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 CRYBB2P43320 205 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 SLC6A9P48067 706 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-202ENST00000463060 NCMAPQ5T1S8 102 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM244Q5VVB8 128 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 RFPL4BQ6ZWI9 263 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 SATL1Q86VE3 508 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 MS4A15Q8N5U1 240 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 PGAM5Q96HS1 289 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 POFUT1Q9H488 388 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF281Q9Y2X9 895 aa12.37□□□□□ -0.43
COL6A1-202ENST00000463060 TRBV5-5A0A0J9YX44 114 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 LOC390937A0A1W2PQ73 354 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 CRYAAP02489 173 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 UBCP0CG48 685 aaKnown RBP12.36□□□□□ -0.43
COL6A1-202ENST00000463060 TUBG1P23258 451 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 GABRA5P31644 462 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 RPS25P62851 125 aaKnown RBP12.36□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF92Q03936 586 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 BSPH1Q075Z2 132 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 TNK1Q13470 666 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 GLYATL3Q5SZD4 288 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM91Q6ZNR0 172 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 GPR141Q7Z602 305 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 OR51A4Q8NGJ6 313 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 OR51E1Q8TCB6 317 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 SOX7Q9BT81 388 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
COL6A1-202ENST00000463060 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 OR10A2Q9H208 303 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 TUBG2Q9NRH3 451 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 CRIM1Q9NZV1 1036 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 EIF3KQ9UBQ5 218 aaKnown RBP12.36□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF391Q9UJN7 358 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 GTF2A1LQ9UNN4 478 aa12.36□□□□□ -0.43
COL6A1-202ENST00000463060 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 LOC107986453A0A1B0GWG9 222 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 H3BSA7 217 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 P2RY10O00398 339 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 XRCC2O43543 280 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 ACHEP22303 614 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 GALP22466 123 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 GADD45AP24522 165 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 RAD52P43351 418 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 KIR2DL3P43628 341 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 FABP5Q01469 135 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 DAZAP2Q15038 168 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-202ENST00000463060 TRAM1Q15629 374 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 ODF4Q2M2E3 257 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 YIF1BQ5BJH7 314 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 BEX5Q5H9J7 111 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 FBXW12Q6X9E4 464 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 SLC16A12Q6ZSM3 486 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 KRT74Q7RTS7 529 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 ANKRD13BQ86YJ7 626 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 C1orf174Q8IYL3 243 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF676Q8N7Q3 588 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 OR13C5Q8NGS8 318 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 FAM222BQ8WU58 562 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 ITFG2Q969R8 447 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM203Q969S6 136 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 TRMT61AQ96FX7 289 aaKnown RBP12.35□□□□□ -0.43
COL6A1-202ENST00000463060 MARS2Q96GW9 593 aaKnown RBP12.35□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 COMMD4Q9H0A8 199 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 RBM38Q9H0Z9 239 aaKnown RBP12.35□□□□□ -0.43
COL6A1-202ENST00000463060 OR51E2Q9H255 320 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 GPR84Q9NQS5 396 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 V9GYS6 101 aa12.35□□□□□ -0.43
COL6A1-202ENST00000463060 hCG_38984A0A1B0GV85 526 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 TRDV1A0A1B0GX56 115 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 DPPA5A6NC42 116 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 A6NHS1 94 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 TBX1O43435 398 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 GPX5O75715 221 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 FAM157BP0CG42 384 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 PSMA1P25786 263 aaKnown RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 FGF9P31371 208 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 MAGEB1P43366 347 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms