RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 BPIFB2Q8N4F0 458 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 SPERTQ8NA61 448 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF511Q8NB15 262 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 BHLHE23Q8NDY6 225 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR10AD1Q8NGE0 317 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR51L1Q8NGJ5 315 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR8D4Q8NGM9 314 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR10S1Q8NGN2 331 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR11L1Q8NGX0 322 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OR4Q3Q8NH05 313 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF420Q8TAQ5 688 aaPredicted RBP6.11□□□□□ -1.43
PTPRF-210ENST00000463041 Q8TCH9 128 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 GIPC3Q8TF64 312 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 ZNRF4Q8WWF5 429 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 DVL3Q92997 716 aaPredicted RBP6.11□□□□□ -1.43
PTPRF-210ENST00000463041 FEVQ99581 238 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 TMEM246Q9BRR3 403 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 THTPAQ9BU02 230 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 MRI1Q9BV20 369 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 CHID1Q9BWS9 393 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 PLA2G12AQ9BZM1 189 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 OPA3Q9H6K4 179 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 CMC2Q9NRP2 79 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 CENPMQ9NSP4 180 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 TBC1D23Q9NUY8 699 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 NUP50Q9UKX7 468 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 PPIAL4AQ9Y536 164 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 U3KQV3 271 aa6.11□□□□□ -1.43
PTPRF-210ENST00000463041 KIR2DS1A0A191URI9 304 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 TMEM89A2RUT3 159 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ARRDC5A6NEK1 342 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GGT3PA6NGU5 568 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 AQP12BA6NM10 295 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 RIIAD1A6NNX1 92 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 HAX1O00165 279 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 DYNC1I1O14576 645 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GNGT2O14610 69 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 NDUFA2O43678 99 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 PTBP3O95758 552 aaKnown RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 CYB5R3P00387 301 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 HMGN1P05114 100 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 SPARCP09486 303 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF3P17036 446 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 CA6P23280 308 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 CD80P33681 288 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GRK5P34947 590 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 RPS27P42677 84 aaKnown RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 COMPP49747 757 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 PRKXP51817 358 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GNB2P62879 340 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GRB2P62993 217 aaKnown RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF92Q03936 586 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 CRMP1Q14194 572 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 KCNJ8Q15842 424 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 TUSC1Q2TAM9 212 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF404Q494X3 552 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 BTNL3Q6UXE8 466 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 LRRN1Q6UXK5 716 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 RBMS3Q6XE24 437 aaKnown RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF771Q7L3S4 317 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 SHFQ7M4L6 423 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 NLRC3Q7RTR2 1065 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 AQP12AQ8IXF9 295 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 DEFB108BQ8NET1 73 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 OR10G2Q8NGC3 310 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 OR9Q1Q8NGQ5 310 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 CANT1Q8WVQ1 401 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 RAB40AQ8WXH6 277 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 GCDHQ92947 438 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 SLAMF6Q96DU3 332 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 NEIL1Q96FI4 390 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 COPS4Q9BT78 406 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 TOR3AQ9H497 397 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 YY1AP1Q9H869 796 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 FN3KRPQ9HA64 309 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 TRIM36Q9NQ86 728 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 ARMC1Q9NVT9 282 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 VNN3Q9NY84 501 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 MRPL15Q9P015 296 aaKnown RBP6.1□□□□□ -1.43
PTPRF-210ENST00000463041 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 COMMD3-BMI1R4GMX3 469 aa6.1□□□□□ -1.43
PTPRF-210ENST00000463041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 DHRS12A0PJE2 317 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF878C9JN71 531 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 H3BN98 237 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 GYG2O15488 501 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 XRCC2O43543 280 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 FAM20BO75063 409 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 GLCEO94923 617 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF205O95201 554 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SOX14O95416 240 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 GYPBP06028 91 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 LIPFP07098 398 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 CLUP10909 449 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ANXA8P13928 327 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms