RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	LIPE	Q05469	1076 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	PGM2L1	Q6PCE3	622 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	DPY19L2P2	Q6ZN68	376 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF620	Q6ZNG0	422 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZBTB46	Q86UZ6	589 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	PIP4P2	Q8N4L2	257 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	SSMEM1	Q8WWF3	244 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	DYRK2	Q92630	601 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	RCN3	Q96D15	328 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	C7orf34	Q96L11	122 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	WDFY2	Q96P53	400 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	RERGL	Q9H628	205 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	ACOXL	Q9NUZ1	547 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	GID8	Q9NWU2	228 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	MRPL22	Q9NWU5	206 aa	Known RBP	9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	NDUFAF4	Q9P032	175 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	CYB5R1	Q9UHQ9	305 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	RPS6KA6	Q9UK32	745 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	IGHV1-69D	A0A0B4J2H0	117 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815		A0A0U1RQK1	487 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815		M0QZ24	198 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	LGALS8	O00214	317 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	TOX4	O94842	621 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNF682	O95780	498 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	SERPINA1	P01009	418 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	LHB	P01229	141 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	IGHV1-69	P01742	117 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	CALB2	P22676	271 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	OTX1	P32242	354 aa	Predicted RBP	9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	TRAP1	Q12931	704 aa	Known RBP	9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	SNAI3	Q3KNW1	292 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815		Q6ZSV7	163 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	FAM90A1	Q86YD7	464 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	LINC00346	Q8IVM7	164 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	FGFRL1	Q8N441	504 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	GCSAM	Q8N6F7	178 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	FAM86B1	Q8N7N1	296 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	GATAD2B	Q8WXI9	593 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLCO4A1	Q96BD0	722 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	MAP6	Q96JE9	813 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	TECTB	Q96PL2	329 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	ATF6B	Q99941	703 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	PKP2	Q99959	881 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	HCAR1	Q9BXC0	346 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	EFCAB1	Q9HAE3	211 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	UFSP2	Q9NUQ7	469 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815	RNF114	Q9Y508	228 aa		9.21	□□□□□ -0.94
PTPN7-204	ENST00000462815		A0A1B0GW55	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC22A31	A6NKX4	558 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815		B2RBV5	119 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	TIMM23	O14925	209 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ARPC3	O15145	178 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	SEMG1	P04279	462 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	CRYBA1	P05813	215 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	LIPF	P07098	398 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	H1F0	P07305	194 aa	Known RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L2	P0CJ85	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L3	P0CJ86	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L4	P0CJ87	422 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L5	P0CJ88	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L6	P0CJ89	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L7	P0CJ90	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	HIST1H1C	P16403	213 aa	Known RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	CA6	P23280	308 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	CRABP1	P29762	137 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	GSK3B	P49841	420 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ELF3	P78545	371 aa	Predicted RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNF92	Q03936	586 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	PDCD1	Q15116	288 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	TAF9	Q16594	264 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZSCAN26	Q16670	478 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	TEX36	Q5VZQ5	186 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	CD276	Q5ZPR3	534 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	SFRP4	Q6FHJ7	346 aa	Predicted RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4L9	Q6RFH8	374 aa	Predicted RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	SMARCD3	Q6STE5	483 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	HACD2	Q6Y1H2	254 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ARPIN	Q7Z6K5	226 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	PLPP7	Q8NBV4	271 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	LY6G5B	Q8NDX9	201 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR11L1	Q8NGX0	322 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	NMNAT3	Q96T66	252 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DDO	Q99489	341 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	RASSF4	Q9H2L5	321 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	C16orf95	Q9H693	158 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	TAS2R1	Q9NYW7	299 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	RNF7	Q9UBF6	113 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	KAAG1	Q9UBP8	84 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	DUX4	Q9UBX2	424 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	POLR1D	Q9Y2S0	133 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	AP3M1	Q9Y2T2	418 aa		9.2	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR6C68	A6NDL8	312 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	OOEP	A6NGQ2	149 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	UNC119B	A6NIH7	251 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	CD300LB	A8K4G0	201 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	C3orf80	F5H4A9	247 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815		F5H5K5	113 aa		9.19	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms