RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ZFP3Q96NJ6 502 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 ZMAT5Q9UDW3 170 aaKnown RBP12.75□□□□□ -0.37
HDAC6-213ENST00000462730 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 CACNG2Q9Y698 323 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 FRYQ5TBA9 3013 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 LINC00862A6NCI5 91 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 CEACAM4O75871 244 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 SNAPC5O75971 98 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 ITGB2P05107 769 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 SLC2A1P11166 492 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF121P58317 390 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-213ENST00000462730 PMP22Q01453 160 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 FCN2Q15485 313 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 HACD4Q5VWC8 232 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 CDH24Q86UP0 819 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 SERPINA12Q8IW75 414 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 MEIOBQ8N635 442 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF283Q8N7M2 679 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 PHF21AQ96BD5 680 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 MED28Q9H204 178 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 SPTBN2O15020 2390 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 A0A1B0GVI7 797 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 SYT7O43581 403 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 DHFRP00374 187 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF708P17019 499 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
HDAC6-213ENST00000462730 DGCR2P98153 550 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 PLPP7Q8NBV4 271 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 OR8B12Q8NGG6 310 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 AUP1Q9Y679 476 aa12.74□□□□□ -0.37
HDAC6-213ENST00000462730 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 SLC17A2O00624 439 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 SYNGR4O95473 234 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 SDHBP21912 280 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 CFPP27918 469 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ART1P52961 327 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 SPOCK1Q08629 439 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 RNFT1Q5M7Z0 435 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 KRT74Q7RTS7 529 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.73□□□□□ -0.37
HDAC6-213ENST00000462730 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 OR51A2Q8NGJ7 313 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 OR51E1Q8TCB6 317 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 FGGYQ96C11 551 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ALKBH3Q96Q83 286 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-213ENST00000462730 NKX3-1Q99801 234 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-213ENST00000462730 GHITMQ9H3K2 345 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF275Q9NSD4 429 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-213ENST00000462730 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
HDAC6-213ENST00000462730 TSC22D2O75157 780 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ITGA5P08648 1049 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 CD3GP09693 182 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 STOMP27105 288 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 MMP15P51511 669 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 PLA2G7Q13093 441 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SLC10A1Q14973 349 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 PLXDC2Q6UX71 529 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 LINGO2Q7L985 606 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 COMMD2Q86X83 199 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 OR11H7Q8NGC8 314 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 OR1J2Q8NGS2 313 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 YIPF5Q969M3 257 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 S100A16Q96FQ6 103 aaKnown RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 GPR137Q96N19 417 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ZSCAN5BA6NJL1 495 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ANOS1P23352 680 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 GNALP38405 381 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SCAND1P57086 179 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 SLC36A2Q495M3 483 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 PRSS45Q7RTY3 260 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 OR51D1Q8NGF3 324 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 OR8H1Q8NGG4 311 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 HAVCR1Q96D42 359 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 FBXO17Q96EF6 278 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 DEFB127Q9H1M4 99 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 DPAGT1Q9H3H5 408 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 KCNK15Q9H427 330 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 RANBP3Q9H6Z4 567 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ZDHHC11Q9H8X9 412 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms