RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PRAMEF6Q5VXH4 476 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 LYPD2Q6UXB3 125 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 PNLDC1Q8NA58 520 aaKnown RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 PLPP7Q8NBV4 271 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 OR52L1Q8NGH7 329 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 DACT3Q96B18 629 aaPredicted RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 ZNF799Q96GE5 643 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 PYURFQ96I23 114 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 ADAT1Q9BUB4 502 aaKnown RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 CYB5R1Q9UHQ9 305 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 SOX21Q9Y651 276 aaPredicted RBP12.82□□□□□ -0.36
SKA3-204ENST00000462482 V9GYQ6 96 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 MEGF8Q7Z7M0 2845 aa12.82□□□□□ -0.36
SKA3-204ENST00000462482 WNK2Q9Y3S1 2297 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 ZNF879B4DU55 563 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 ADAM20O43506 726 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 PSMB10P40306 273 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 RAG2P55895 527 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 DEFA6Q01524 100 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 TAF13Q15543 124 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
SKA3-204ENST00000462482 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 FIP1L1Q6UN15 594 aaKnown RBP12.81□□□□□ -0.36
SKA3-204ENST00000462482 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 TMEM86BQ8N661 226 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 SDR9C7Q8NEX9 313 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 PROKR2Q8NFJ6 384 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 GNPDA2Q8TDQ7 276 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 GATAD2BQ8WXI9 593 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 TRIM15Q9C019 465 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 PRDM13Q9H4Q3 707 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 GORASP2Q9H8Y8 452 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 MARCH7Q9H992 704 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 MAGEL2Q9UJ55 1249 aa12.81□□□□□ -0.36
SKA3-204ENST00000462482 TANC2Q9HCD6 1990 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 A6NLC8 198 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 C22orf46C9J442 243 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.8□□□□□ -0.36
SKA3-204ENST00000462482 PDCD1Q15116 288 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 MPPED2Q15777 294 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 CLEC12AQ5QGZ9 265 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 SFRP4Q6FHJ7 346 aaPredicted RBP12.8□□□□□ -0.36
SKA3-204ENST00000462482 RPL13AP3Q6NVV1 102 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 DRAM2Q6UX65 266 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 Q6YL49 198 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 NAA40Q86UY6 237 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 RNF148Q8N7C7 305 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 OR2T4Q8NH00 348 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 COPS4Q9BT78 406 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 FN3KQ9H479 309 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 OPA3Q9H6K4 179 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 C14orf119Q9NWQ9 140 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
SKA3-204ENST00000462482 POMT1Q9Y6A1 747 aa12.8□□□□□ -0.36
SKA3-204ENST00000462482 hCG_1807616A0A1W2PRN6 198 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 OR6C68A6NDL8 312 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 FABP3P05413 133 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 PRDX6P30041 224 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 GRK5P34947 590 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 CFHR2P36980 270 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 TSPAN31Q12999 210 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 MIDNQ504T8 468 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
SKA3-204ENST00000462482 SLC35F1Q5T1Q4 408 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 OLFML2AQ68BL7 652 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 KIR3DL3Q8N743 410 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 FAM86B1Q8N7N1 296 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.36
SKA3-204ENST00000462482 NSMCE2Q96MF7 247 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 WDFY2Q96P53 400 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 FUZQ9BT04 418 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 PNRC2Q9NPJ4 139 aaKnown RBP12.79□□□□□ -0.36
SKA3-204ENST00000462482 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
SKA3-204ENST00000462482 M0QZ24 198 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 BHLHE40O14503 412 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 TNFRSF13BO14836 293 aaPredicted RBP12.78□□□□□ -0.36
SKA3-204ENST00000462482 NDUFA7O95182 113 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
SKA3-204ENST00000462482 GRPP07492 148 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 SFTPBP07988 381 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
SKA3-204ENST00000462482 ZNF92Q03936 586 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 ZNF620Q6ZNG0 422 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 LNX2Q8N448 690 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms