RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ENTPD1P49961 510 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 MMP16P51512 607 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 GRB2P62993 217 aaKnown RBP7.48□□□□□ -1.21
LDB1-203ENST00000461873 FLOT2Q14254 428 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 GK3PQ14409 553 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 SNCBQ16143 134 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 TIGD6Q17RP2 521 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 MICAQ29983 383 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 OR2T5Q6IEZ7 315 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 DRAM2Q6UX65 266 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 CFAP77Q6ZQR2 320 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 DCXRQ7Z4W1 244 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 TSEN54Q7Z6J9 526 aaKnown RBP7.48□□□□□ -1.21
LDB1-203ENST00000461873 C10orf67Q8IYJ2 551 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 LNX2Q8N448 690 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 BOLLQ8N9W6 283 aaKnown RBP7.48□□□□□ -1.21
LDB1-203ENST00000461873 SPERTQ8NA61 448 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 CYB561A3Q8NBI2 242 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 OR2T29Q8NH02 315 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 ZNF420Q8TAQ5 688 aaPredicted RBP7.48□□□□□ -1.21
LDB1-203ENST00000461873 NEIL1Q96FI4 390 aaPredicted RBP7.48□□□□□ -1.21
LDB1-203ENST00000461873 SLC30A2Q9BRI3 323 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 C1QTNF5Q9BXJ0 243 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 C14orf119Q9NWQ9 140 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 CYB5R1Q9UHQ9 305 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 NUP50Q9UKX7 468 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 LYVE1Q9Y5Y7 322 aa7.48□□□□□ -1.21
LDB1-203ENST00000461873 IGHV3-64DA0A0J9YX35 117 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ZNF878C9JN71 531 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 DCTN6O00399 190 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ZNF593O00488 134 aaPredicted RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 XRCC2O43543 280 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 GMDSO60547 372 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 VENTXO95231 258 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 HLA-DPB1P04440 258 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 RAP2AP10114 183 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 CFL1P23528 166 aaKnown RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 POU1F1P28069 291 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 GNALP38405 381 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 PRKXP51817 358 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 HMGA2P52926 109 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 FXYD6P3P58550 94 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 HILS1P60008 231 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 RPS7P62081 194 aaKnown RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 HIST1H3AP68431 136 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ZNF154Q13106 437 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 EIF2B1Q14232 305 aaKnown RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 GK2Q14410 553 aaPredicted RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 ZMYND11Q15326 602 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 OR8B8Q15620 311 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 HIST2H3PS2Q5TEC6 136 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 CD276Q5ZPR3 534 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 Q6ZR03 302 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 HIST2H3AQ71DI3 136 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 SHFQ7M4L6 423 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 SLC37A3Q8NCC5 494 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 OR10G2Q8NGC3 310 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 OR51L1Q8NGJ5 315 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 GIPC3Q8TF64 312 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 FAM216AQ8WUB2 273 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 PYDC1Q8WXC3 89 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 C22orf15Q8WYQ4 148 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ASB9Q96DX5 294 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ZMYND19Q96E35 227 aaPredicted RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 TECTBQ96PL2 329 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 KCNJ15Q99712 375 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 SLC6A7Q99884 636 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 FUZQ9BT04 418 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ADAT1Q9BUB4 502 aaKnown RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 UFSP2Q9NUQ7 469 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 IL20Q9NYY1 176 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 ERVK-18Q9QC07 812 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 CLN8Q9UBY8 286 aa7.47□□□□□ -1.21
LDB1-203ENST00000461873 NKX1-2Q9UD57 310 aaPredicted RBP7.47□□□□□ -1.21
LDB1-203ENST00000461873 MXRA5Q9NR99 2828 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 TRAV38-1A0A0B4J264 116 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 CEACAM18A8MTB9 384 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 H0YL77 283 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 BHLHE40O14503 412 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 NDUFA2O43678 99 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 ZNF205O95201 554 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 SOX14O95416 240 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 BAG2O95816 211 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 GRPP07492 148 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 H2BFMP0C1H6 154 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 CA6P23280 308 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 DDOSTP39656 456 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 PITPNBP48739 271 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 NPY4RP50391 375 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 ACTR3P61158 418 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 PPP1R8Q12972 351 aaKnown RBP7.46□□□□□ -1.22
LDB1-203ENST00000461873 BAMBIQ13145 260 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 ZNF181Q2M3W8 571 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 GFOD2Q3B7J2 385 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 LCN8Q6JVE9 175 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms