RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 MYPOPQ86VE0 399 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 CDC20BQ86Y33 519 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 GPR137CQ8N3F9 429 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 ARIH2OSQ8N7S6 290 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 AQP11Q8NBQ7 271 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 NOXO1Q8NFA2 376 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 GJC3Q8NFK1 279 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 OR10G2Q8NGC3 310 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 OR6N1Q8NGY5 312 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 MAGEE2Q8TD90 523 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 PYDC1Q8WXC3 89 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 SNAPC3Q92966 411 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 NABP1Q96AH0 204 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 RASD2Q96D21 266 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 PGAM5Q96HS1 289 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 DDOQ99489 341 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 TMEM204Q9BSN7 226 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 C1QTNF6Q9BXI9 259 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 POLDIP3Q9BY77 421 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 ULBP2Q9BZM5 246 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 REEP1Q9H902 201 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 NOX3Q9HBY0 568 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 B3GNT2Q9NY97 397 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 IL20Q9NYY1 176 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 DNAJB9Q9UBS3 223 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 LSM4Q9Y4Z0 139 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 AP4S1Q9Y587 144 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 IER3IP1Q9Y5U9 82 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 A3GALT2U3KPV4 340 aa6.91□□□□□ -1.3
ECHDC1-212ENST00000461239 ARPC4-TTLL3A0A0A6YYG9 625 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ARRDC5A6NEK1 342 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 CENPBD1B2RD01 187 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ANKRD65E5RJM6 399 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 DCTN6O00399 190 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 BHLHE40O14503 412 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 AKAP8O43823 692 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 KRT33AO76009 404 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 PPP1R3DO95685 299 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 PATE4P0C8F1 98 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 B4GALT1P15291 398 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 RPL4P36578 427 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 DAPP51397 102 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 DAP3P51398 398 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 SPOCK1Q08629 439 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ATP6AP1Q15904 470 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 PIK3CD-AS1Q5SR53 167 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 DPY19L2P2Q6ZN68 376 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 RASSF6Q6ZTQ3 369 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 FOXL2NBQ6ZUU3 175 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ABHD12BQ7Z5M8 362 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 P2RY8Q86VZ1 359 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 SKA3Q8IX90 412 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 C17orf78Q8N4C9 275 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 LINC00471Q8N535 108 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 OR4Q3Q8NH05 313 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 FANK1Q8TC84 345 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 GIPC3Q8TF64 312 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 NEUROG1Q92886 237 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 PIK3IP1Q96FE7 263 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 LURAP1Q96LR2 239 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 SIGLEC11Q96RL6 698 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ALG12Q9BV10 488 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 C1QTNF5Q9BXJ0 243 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 TMEM38BQ9NVV0 291 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ZNF226Q9NYT6 803 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 PDP1Q9P0J1 537 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 CRNNQ9UBG3 495 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 FBXL17Q9UF56 701 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 MGAT4BQ9UQ53 548 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 CDH10Q9Y6N8 788 aa6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-212ENST00000461239 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 IGHV1-18A0A0C4DH31 117 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 PRSS37A4D1T9 235 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 SOCS2O14508 198 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 CASKO14936 926 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ARPC3O15145 178 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ARHGEF9O43307 516 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ENTPD5O75356 428 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 CIB2O75838 187 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 SOX14O95416 240 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 IGLV1-44P01699 117 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 HLA-HP01893 362 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 HIST1H1CP16403 213 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 CTLA4P16410 223 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 IFNGR2P38484 337 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ZNF83P51522 516 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 SH3BGRP55822 239 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 TGFBR3Q03167 851 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 KRR1Q13601 381 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 GK3PQ14409 553 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ESCO2Q56NI9 601 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 BEX5Q5H9J7 111 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 CLEC12AQ5QGZ9 265 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 OTPQ5XKR4 325 aa6.89□□□□□ -1.31
ECHDC1-212ENST00000461239 ACSM5Q6NUN0 579 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms