RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 PAQR8Q8TEZ7 354 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SLC5A7Q9GZV3 580 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SHPKQ9UHJ6 478 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 PIGLQ9Y2B2 252 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ARHGDIBP52566 201 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 CARD18P57730 90 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 KLF9Q13886 244 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ARL6IP1Q15041 203 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 RHBDD2Q6NTF9 364 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SULF2Q8IWU5 870 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 WIF1Q9Y5W5 379 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 MPDZO75970 2070 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 A0A0B4J293 547 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 ANKRD20A5PA0PJZ0 165 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 SNRPGP15A8MWD9 76 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 FADS1O60427 444 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 EIF1BO60739 113 aaKnown RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 BGLAPP02818 100 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 IL11P20809 199 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 HOXC12P31275 282 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 INSM1Q01101 510 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 BAMBIQ13145 260 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 MEX3BQ6ZN04 569 aaKnown RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 MUC20Q8N307 709 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 RBPMSQ93062 196 aaKnown RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 CMTM3Q96MX0 182 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 ZCCHC4Q9H5U6 513 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 SCPEP1Q9HB40 452 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 LANCL2Q9NS86 450 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 ABCA4P78363 2273 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 HLA-DQB1P01920 261 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 EXOSC6Q5RKV6 272 aaKnown RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 LINC00696Q6ZRV3 163 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 MOB3CQ70IA8 216 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 OR52N4Q8NGI2 321 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 OR1J2Q8NGS2 313 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 MARCH1Q8TCQ1 289 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 RADILQ96JH8 1075 aa10.4□□□□□ -0.74
NPHP4-204ENST00000460696 CMSS1Q9BQ75 279 aaKnown RBP10.4□□□□□ -0.74
NPHP4-204ENST00000460696 HELZP42694 1942 aaKnown RBP10.4□□□□□ -0.75
NPHP4-204ENST00000460696 OR5H14A6NHG9 310 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 TGM6O95932 706 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 CHRM2P08172 466 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 MSR1P21757 451 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 RFC3P40938 356 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 CCL11P51671 97 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 RAG2P55895 527 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF616Q08AN1 781 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 DCAF12Q5T6F0 453 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 LINC01590Q5TEZ4 76 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 PGAP1Q75T13 922 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 SLC51BQ86UW2 128 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 OXGR1Q96P68 337 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 GPR173Q9NS66 373 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 PRELID1Q9Y255 219 aa10.4□□□□□ -0.75
NPHP4-204ENST00000460696 FBXO24O75426 580 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 S100A6P06703 90 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 GGTLC2Q14390 218 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 INPP5JQ15735 1006 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 PLCXD3Q63HM9 321 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 VASH2Q86V25 355 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 FAM181AQ8N9Y4 354 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 GHITMQ9H3K2 345 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 UBE2J1Q9Y385 318 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 MRPL33O75394 65 aaKnown RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 EPHA8P29322 1005 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 ID4P47928 161 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 PRSS12P56730 875 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 EGR4Q05215 589 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 HAGHLQ6PII5 290 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 GVQW1Q8N7I0 195 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 FNDC9Q8TBE3 224 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 ASB5Q8WWX0 329 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF845Q96IR2 970 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-204ENST00000460696 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 RALGAPA1Q6GYQ0 2036 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 HEATR5AQ86XA9 2040 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 A0A0D9SG52 128 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 FAHP16930 419 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 ENPP1P22413 925 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 P2RX3P56373 397 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 MALLQ13021 153 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 RFPL4BQ6ZWI9 263 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 DOK3Q7L591 496 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 SLC25A38Q96DW6 304 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 PIGQQ9BRB3 760 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 PCED1AQ9H1Q7 454 aa10.39□□□□□ -0.75
NPHP4-204ENST00000460696 M0R135 149 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 HSPB6O14558 160 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 UPK3AO75631 287 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PNPP00491 289 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ACSM4P0C7M7 580 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 CPT2P23786 658 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms