RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SLC2A2P11168 524 aaPredicted RBP21.28■■□□□ 1
U2AF1-204ENST00000459639 CD40LGP29965 261 aa21.28■■□□□ 1
U2AF1-204ENST00000459639 RAB1AP62820 205 aa21.28■■□□□ 1
U2AF1-204ENST00000459639 C1orf162Q8NEQ5 155 aaPredicted RBP21.28■■□□□ 1
U2AF1-204ENST00000459639 OR1J2Q8NGS2 313 aa21.28■■□□□ 1
U2AF1-204ENST00000459639 BOD1Q96IK1 185 aa21.28■■□□□ 1
U2AF1-204ENST00000459639 C5orf63A6NC05 138 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 SLC19A2O60779 497 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 CEACAM8P31997 349 aaPredicted RBP21.27■■□□□ 1
U2AF1-204ENST00000459639 PPP5CP53041 499 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 SNAI3Q3KNW1 292 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 Q6ZSR3 168 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 SERPINA12Q8IW75 414 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 GABRG1Q8N1C3 465 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 RPRMLQ8N4K4 120 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 KDF1Q8NAX2 398 aaPredicted RBP21.27■■□□□ 1
U2AF1-204ENST00000459639 FGGYQ96C11 551 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 FAM71F1Q96KD3 344 aaPredicted RBP21.27■■□□□ 1
U2AF1-204ENST00000459639 LYZL4Q96KX0 146 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 B3GNT2Q9NY97 397 aa21.27■■□□□ 1
U2AF1-204ENST00000459639 PRRC2CQ9Y520 2896 aaKnown RBP21.26■□□□□ 0.99
U2AF1-204ENST00000459639 HPGDSO60760 199 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 HOXB1P14653 301 aaPredicted RBP21.26■□□□□ 0.99
U2AF1-204ENST00000459639 CFPP27918 469 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 PLP2Q04941 152 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 GSG1Q2KHT4 349 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 GFOD2Q3B7J2 385 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 NAXEQ8NCW5 288 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 TRMT10AQ8TBZ6 339 aaKnown RBP21.26■□□□□ 0.99
U2AF1-204ENST00000459639 MRI1Q9BV20 369 aa21.26■□□□□ 0.99
U2AF1-204ENST00000459639 MEGF11A6BM72 1044 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 RAD51DO75771 328 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 LCATP04180 440 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF20P17024 532 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 GABRA6Q16445 453 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 DOLPP1Q86YN1 238 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 OR14K1Q8NGZ2 314 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 ADAT3Q96EY9 351 aaPredicted RBP21.25■□□□□ 0.99
U2AF1-204ENST00000459639 SFXN3Q9BWM7 321 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF391Q9UJN7 358 aa21.25■□□□□ 0.99
U2AF1-204ENST00000459639 CIB4A0PJX0 185 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 DHRS3O75911 302 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 LYZL6O75951 148 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 GLI4P10075 376 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 STOMP27105 288 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 DDOSTP39656 456 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 RBPJQ06330 500 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 HES5Q5TA89 166 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 DNAAF1Q8NEP3 725 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 OR5D14Q8NGL3 314 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 DIRAS2Q96HU8 199 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 SOX7Q9BT81 388 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 C1QTNF5Q9BXJ0 243 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 V9GYH0 126 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 V9GYS6 101 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 ATMQ13315 3056 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 BOD1L1Q8NFC6 3051 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 LOC100509620A0A075B734 347 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 MTRF1O75570 445 aaKnown RBP21.24■□□□□ 0.99
U2AF1-204ENST00000459639 SFTPCP11686 197 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 EDN3P14138 238 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 UBE2NP61088 152 aaKnown RBP21.24■□□□□ 0.99
U2AF1-204ENST00000459639 C16orf87Q6PH81 154 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 BEND4Q6ZU67 534 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 NKAIN3Q8N8D7 197 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF610Q8N9Z0 462 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 OPN3Q9H1Y3 402 aaPredicted RBP21.24■□□□□ 0.99
U2AF1-204ENST00000459639 RGCCQ9H4X1 137 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 PLEKHA1Q9HB21 404 aa21.24■□□□□ 0.99
U2AF1-204ENST00000459639 PIEZO2Q9H5I5 2752 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 LOC390937A0A1W2PQ73 354 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 PAHP00439 452 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 GNALP38405 381 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 P2RY6Q15077 328 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 GLT8D1Q68CQ7 371 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF529Q6P280 563 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 C3P1Q6ZMU1 363 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 COLCA1Q6ZS62 124 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 PGAP1Q75T13 922 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 MDP1Q86V88 176 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 LRRC28Q86X40 367 aaPredicted RBP21.23■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF671Q8TAW3 534 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 SGK3Q96BR1 496 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 SPATA2Q9UM82 520 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 ZGRF1Q86YA3 2104 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 RTTNQ86VV8 2226 aa21.23■□□□□ 0.99
U2AF1-204ENST00000459639 CALCBP10092 127 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 CD37P11049 281 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 SNRPBP14678 240 aaKnown RBP21.22■□□□□ 0.99
U2AF1-204ENST00000459639 EVX1P49640 407 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 ZNF584Q8IVC4 421 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 SAMD12Q8N8I0 201 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 OR1M1Q8NGA1 313 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 C10orf35Q96D05 121 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 REEP6Q96HR9 211 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 POM121L2Q96KW2 1035 aa21.22■□□□□ 0.99
U2AF1-204ENST00000459639 DHRS7CA6NNS2 312 aa21.21■□□□□ 0.99
U2AF1-204ENST00000459639 XRCC2O43543 280 aa21.21■□□□□ 0.99
U2AF1-204ENST00000459639 SCAND1P57086 179 aa21.21■□□□□ 0.99
U2AF1-204ENST00000459639 CNIH2Q6PI25 160 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms