RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 BAP18Q8IXM2 172 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 YAF2Q8IY57 180 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 FRMD1Q8N878 549 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 DTWD2Q8NBA8 298 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 OR4D6Q8NGJ1 314 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 OR13C3Q8NGS6 347 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 ZNF563Q8TA94 476 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 RNASE11Q8TAA1 199 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 POC1BQ8TC44 478 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 METTL21AQ8WXB1 218 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CNTNAP3BQ96NU0 1288 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 KLHDC3Q9BQ90 382 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 TLNRD1Q9H1K6 362 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 ZMAT3Q9HA38 289 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 G6PC2Q9NQR9 355 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 ASH2LQ9UBL3 628 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 GTF2A1LQ9UNN4 478 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 TRANK1O15050 2925 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 LOC107986453A0A1B0GWG9 222 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR6C76A6NM76 312 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CEACAM18A8MTB9 384 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 C11orf98E9PRG8 122 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SMAD9O15198 467 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 SLC16A7O60669 478 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 NPIPB7O75200 414 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SCGNO76038 276 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR6A2O95222 327 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ERCC1P07992 297 aaPredicted RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 LIPCP11150 499 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CTLA4P16410 223 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ABOP16442 354 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 DNASE1L1P49184 302 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 AKR1C2P52895 323 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SLC37A1P57057 533 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 TAS2R31P59538 309 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 QRFPP83859 136 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ZNF117Q03924 483 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 AKR1C1Q04828 323 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SPOCK1Q08629 439 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 PCK2Q16822 640 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 MST1LQ2TV78 715 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 PLEKHN1Q494U1 663 aaPredicted RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 TMEM31Q5JXX7 168 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR10K2Q6IF99 312 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 H3F3CQ6NXT2 135 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 TRAPPC6BQ86SZ2 158 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 PARGQ86W56 976 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SKA3Q8IX90 412 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 JAGN1Q8N5M9 183 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 C19orf47Q8N9M1 422 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 BOLLQ8N9W6 283 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 ADAD2Q8NCV1 583 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 SLC37A2Q8TED4 501 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 GLYATL2Q8WU03 294 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 KXD1Q9BQD3 176 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 RNF126Q9BV68 326 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 FN3KRPQ9HA64 309 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ACKR4Q9NPB9 350 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ZFP57Q9NU63 452 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 UQCC1Q9NVA1 299 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 FBLN5Q9UBX5 448 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CSAG2Q9Y5P2 127 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CHD9Q3L8U1 2897 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 TTC28Q96AY4 2481 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 A0A0B4J2A0 478 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR2W5A6NFC9 320 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 FRG2CA6NGY1 282 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 MARCH11A6NNE9 402 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CSN2P05814 226 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 CBR1P16152 277 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 CXCR1P25024 350 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 HSD11B1P28845 292 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 NR0B1P51843 470 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 PJVKQ0ZLH3 352 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 UNC119Q13432 240 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 HYAL4Q2M3T9 481 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 TMEM244Q5VVB8 128 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 C1QL3Q5VWW1 255 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OTPQ5XKR4 325 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 AWAT2Q6E213 333 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 DEGS2Q6QHC5 323 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 MDGA2Q7Z553 956 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 HOGA1Q86XE5 327 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SFTPA2Q8IWL1 248 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ACBD4Q8NC06 268 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR6X1Q8NH79 312 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 PAQR8Q8TEZ7 354 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 FAM46BQ96A09 425 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SAT2Q96F10 170 aaPredicted RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 RRNAD1Q96FB5 475 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SLC46A1Q96NT5 459 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 FOXN4Q96NZ1 517 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ADAT1Q9BUB4 502 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms