RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	CEACAM18	A8MTB9	384 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	TMEM178B	H3BS89	294 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859		J3QW42	95 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	FOXH1	O75593	365 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	FAM107A	O95990	144 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	T-ENOL	P0DO92	83 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	RPS2	P15880	293 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	ANOS1	P23352	680 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SRP9	P49458	86 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	PRKX	P51817	358 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	HMGA2	P52926	109 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	ACTG1	P63261	375 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	ECH1	Q13011	328 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SCGB2A2	Q13296	93 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	TRIM25	Q14258	630 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	MICA	Q29983	383 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SNAI3	Q3KNW1	292 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	PRAMEF6	Q5VXH4	476 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2T5	Q6IEZ7	315 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF770	Q6IQ21	691 aa	Predicted RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC27A4	Q6P1M0	643 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	PGAP1	Q75T13	922 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	C1QL2	Q7Z5L3	287 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	BPIFB2	Q8N4F0	458 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	BOLL	Q8N9W6	283 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	OR10G2	Q8NGC3	310 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2T29	Q8NH02	315 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	TEX47	Q8TBZ9	253 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SPTSSA	Q969W0	71 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC30A2	Q9BRI3	323 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	COPS4	Q9BT78	406 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	THTPA	Q9BU02	230 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	C1QTNF5	Q9BXJ0	243 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	TRIM15	Q9C019	465 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	MUC13	Q9H3R2	512 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	MAGIX	Q9H6Y5	334 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	PATZ1	Q9HBE1	687 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	CENPM	Q9NSP4	180 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	TMEM100	Q9NV29	134 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	IL20	Q9NYY1	176 aa		7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	PRPF19	Q9UMS4	504 aa	Known RBP	7.29	□□□□□ -1.24
RFX3-209	ENST00000451859	IGHV3OR16-10	A0A075B7F0	116 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	GGT3P	A6NGU5	568 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	RIIAD1	A6NNX1	92 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859		H3BN98	237 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	TRAPPC2L	H3BP13	241 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859		J3QLI3	93 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	GNGT2	O14610	69 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	TBX1	O43435	398 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	CST1	P01037	141 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	IFNG	P01579	166 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	IRF2	P14316	349 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	SPI1	P17947	270 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	CA6	P23280	308 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	POU1F1	P28069	291 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	FMO3	P31513	532 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	MDH2	P40926	338 aa	Known RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	ENTPD1	P49961	510 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	RAD23A	P54725	363 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	HOXA4	Q00056	320 aa	Predicted RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	OR8G1	Q15617	311 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	KRTAP27-1	Q3LI81	207 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	TMEM155	Q4W5P6	130 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	ESCO2	Q56NI9	601 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	ARMCX4	Q5H9R4	360 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	GLYATL3	Q5SZD4	288 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	LRRC28	Q86X40	367 aa	Predicted RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	ARHGAP24	Q8N264	748 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	MUC20	Q8N307	709 aa	Predicted RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	TEX29	Q8N6K0	151 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	SEMA6D	Q8NFY4	1073 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2T33	Q8NG76	320 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	NANP	Q8TBE9	248 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	SLAMF6	Q96DU3	332 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	DDO	Q99489	341 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	NIPSNAP1	Q9BPW8	284 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	ADAT1	Q9BUB4	502 aa	Known RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	RBM4	Q9BWF3	364 aa	Known RBP	7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	OR5V1	Q9UGF6	321 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	OPN4	Q9UHM6	478 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	KCNG2	Q9UJ96	466 aa		7.28	□□□□□ -1.24
RFX3-209	ENST00000451859	LRRC30	A6NM36	301 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	CD300LB	A8K4G0	201 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859		F5H0A9	414 aa	Predicted RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF593	O00488	134 aa	Predicted RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	FAM20B	O75063	409 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	E2F6	O75461	281 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ANXA2	P07355	339 aa	Known RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	RAP2A	P10114	183 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF3	P17036	446 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	GATA3	P23771	443 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	CD80	P33681	288 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	PMEL	P40967	661 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	CX3CR1	P49238	355 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	GNB2	P62879	340 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	ZNF92	Q03936	586 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	EIF2B1	Q14232	305 aa	Known RBP	7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	MPPED2	Q15777	294 aa		7.27	□□□□□ -1.25
RFX3-209	ENST00000451859	GFOD2	Q3B7J2	385 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms