RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SNAI3Q3KNW1 292 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 WDR25Q64LD2 544 aaPredicted RBP22.61■■□□□ 1.21
USP42-204ENST00000451154 SHISA2Q6UWI4 295 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 C9orf139Q6ZV77 190 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 CPLX4Q7Z7G2 160 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 PROKR2Q8NFJ6 384 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 OR51L1Q8NGJ5 315 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 SPTSSAQ969W0 71 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 ERGIC1Q969X5 290 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 ARL8BQ9NVJ2 186 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 KCNG2Q9UJ96 466 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 TRAV40A0A0B4J280 105 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 C5orf63A6NC05 138 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 CD300LBA8K4G0 201 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 ZNF92Q03936 586 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 ZNF362Q5T0B9 420 aaPredicted RBP22.6■■□□□ 1.21
USP42-204ENST00000451154 LYPD4Q6UWN0 246 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 ZNF841Q6ZN19 808 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 DCDC5Q6ZRR9 648 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 FITM2Q8N6M3 262 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 BOLLQ8N9W6 283 aaKnown RBP22.6■■□□□ 1.21
USP42-204ENST00000451154 OR9Q2Q8NGE9 314 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 OR2AE1Q8NHA4 323 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 CDH10Q9Y6N8 788 aa22.6■■□□□ 1.21
USP42-204ENST00000451154 MDFIC2A0A1B0GVS7 189 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 BHLHE40O14503 412 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 WIPF1O43516 503 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 KRT36O76013 467 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 PSKH1P11801 424 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 HMGA2P52926 109 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 OR52L1Q8NGH7 329 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 BTBD10Q9BSF8 475 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 UNKLQ9H9P5 680 aaKnown RBP22.59■■□□□ 1.21
USP42-204ENST00000451154 TAGLN3Q9UI15 199 aa22.59■■□□□ 1.21
USP42-204ENST00000451154 CLDN34H7C241 214 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 FGF12P61328 243 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 SFRP4Q6FHJ7 346 aaPredicted RBP22.58■■□□□ 1.21
USP42-204ENST00000451154 BRD3OSQ6XYD6 125 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 OR2T4Q8NH00 348 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 RNF7Q9UBF6 113 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 N6AMT1Q9Y5N5 214 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 LYVE1Q9Y5Y7 322 aa22.58■■□□□ 1.21
USP42-204ENST00000451154 GGT3PA6NGU5 568 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 C22orf46C9J442 243 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 TNFRSF11BO00300 401 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 PHYHO14832 338 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 GASTP01350 101 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 PSMB10P40306 273 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 GLYATL3Q5SZD4 288 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 CYP2R1Q6VVX0 501 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 DCXRQ7Z4W1 244 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 DEFB107AQ8IZN7 70 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 SLC37A3Q8NCC5 494 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 OR8D4Q8NGM9 314 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 OR9Q1Q8NGQ5 310 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 SLC22A4Q9H015 551 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 MMADHCQ9H3L0 296 aaPredicted RBP22.57■■□□□ 1.2
USP42-204ENST00000451154 FN3KRPQ9HA64 309 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 IL20Q9NYY1 176 aa22.57■■□□□ 1.2
USP42-204ENST00000451154 C3orf80F5H4A9 247 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 GMDSO60547 372 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 PRKXP51817 358 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 PPP1R8Q12972 351 aaKnown RBP22.56■■□□□ 1.2
USP42-204ENST00000451154 DEFB112Q30KQ8 113 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 RPL13AP3Q6NVV1 102 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 DRAM2Q6UX65 266 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 ZNF511Q8NB15 262 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 ADAT1Q9BUB4 502 aaKnown RBP22.56■■□□□ 1.2
USP42-204ENST00000451154 CENPMQ9NSP4 180 aa22.56■■□□□ 1.2
USP42-204ENST00000451154 NOP16Q9Y3C1 178 aaKnown RBP22.56■■□□□ 1.2
USP42-204ENST00000451154 SLC2A1P11166 492 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 OTX1P32242 354 aaPredicted RBP22.55■■□□□ 1.2
USP42-204ENST00000451154 IL13RA1P78552 427 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 PRR31Q5SQ13 230 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 ZNF770Q6IQ21 691 aaPredicted RBP22.55■■□□□ 1.2
USP42-204ENST00000451154 C16orf87Q6PH81 154 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 C16orf89Q6UX73 402 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 TECTBQ96PL2 329 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 COPS4Q9BT78 406 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 TRIM15Q9C019 465 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 CTSZQ9UBR2 303 aa22.55■■□□□ 1.2
USP42-204ENST00000451154 LGALS8O00214 317 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 ZNF593O00488 134 aaPredicted RBP22.54■■□□□ 1.2
USP42-204ENST00000451154 GYPBP06028 91 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 GRPP07492 148 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 SPARCP09486 303 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 MXRA7P84157 204 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 TAF13Q15543 124 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 RASSF6Q6ZTQ3 369 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 LNX2Q8N448 690 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 LINC00471Q8N535 108 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 OR4C15Q8NGM1 316 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 ZDHHC16Q969W1 377 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 PCGF1Q9BSM1 259 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 TSSK6Q9BXA6 273 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 RASSF4Q9H2L5 321 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 ZNF696Q9H7X3 374 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 C1orf123Q9NWV4 160 aa22.54■■□□□ 1.2
USP42-204ENST00000451154 MRPL15Q9P015 296 aaKnown RBP22.54■■□□□ 1.2
USP42-204ENST00000451154 ERVK-18Q9QC07 812 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms