RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 OTOSQ8NHW6 89 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 THEM6Q8WUY1 208 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 ASB17Q8WXJ9 295 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 CYB5R1Q9UHQ9 305 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 CMAHPQ9Y471 501 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 A0A1W2PPW3 197 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 DAPL1A0PJW8 107 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 GABARAPO95166 117 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 CSF3P09919 207 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 MYL12AP19105 171 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 SERPINB10P48595 397 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 PPOXP50336 477 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 PLP2Q04941 152 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 ST3GAL4Q11206 333 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 KCTD18Q6PI47 426 aaPredicted RBP14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF367Q7RTV3 350 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF584Q8IVC4 421 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 LINC00346Q8IVM7 164 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 OR52I1Q8NGK6 324 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 MRPL37Q9BZE1 423 aaKnown RBP14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 PLGRKTQ9HBL7 147 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 DYNLRB1Q9NP97 96 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 FKBP14Q9NWM8 211 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 ASH2LQ9UBL3 628 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 FBXL3Q9UKT7 428 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 FZR1Q9UM11 496 aa14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 EXOSC1Q9Y3B2 195 aaKnown RBP14.64□□□□□ -0.07
PRPF40A-204ENST00000450303 ANK3Q12955 4377 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 APOL3O95236 402 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 PTHP01270 115 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 ADRA2AP08913 450 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 CCL2P13500 99 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 ZNF32P17041 273 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 USF1P22415 310 aaPredicted RBP14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 DCXRQ7Z4W1 244 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 LRP11Q86VZ4 500 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 YIPF6Q96EC8 236 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 TBX5Q99593 518 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 SYT3Q9BQG1 590 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 PIMREGQ9BSJ6 248 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 NAA50Q9GZZ1 169 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 RAB1BQ9H0U4 201 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 TPK1Q9H3S4 243 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 DIMT1Q9UNQ2 313 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 SPEF1Q9Y4P9 236 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 LHFPL6Q9Y693 200 aa14.63□□□□□ -0.07
PRPF40A-204ENST00000450303 IQCMA0A1B0GVH7 501 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 A8MV72 311 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 VWC2LB2RUY7 222 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 SGCEO43556 437 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 SERPINA5P05154 406 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 ALOX5APP20292 161 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 GALK2Q01415 458 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 TAF13Q15543 124 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 OTPQ5XKR4 325 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 CORO6Q6QEF8 472 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 RHOUQ7L0Q8 258 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 MRPL24Q96A35 216 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 SIGLEC11Q96RL6 698 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 JAM3Q9BX67 310 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 OR51B6Q9H340 312 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 PLEK2Q9NYT0 353 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 RTTNQ86VV8 2226 aa14.62□□□□□ -0.07
PRPF40A-204ENST00000450303 LOC390937A0A1W2PQ73 354 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 A0A1W2PQL4 384 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 J3QRE1 110 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 IGHA1P01876 353 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 MMP7P09237 267 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 IGHV4-31P0DP07 118 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 DAOP14920 347 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 GLRXP35754 106 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 RPS27P42677 84 aaKnown RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 NR4A2P43354 598 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HCCSP53701 268 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ACTA2P62736 377 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ACTG2P63267 376 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HIST1H3AP68431 136 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 EGR3Q06889 387 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ECH1Q13011 328 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 GALEQ14376 348 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 DGUOKQ16854 277 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 TIGD6Q17RP2 521 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ELFN2Q5R3F8 820 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HIST2H3PS2Q5TEC6 136 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 TMPRSS11AQ6ZMR5 421 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 PLEKHG7Q6ZR37 379 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HIST2H3AQ71DI3 136 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 KCTD20Q7Z5Y7 419 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 KRT77Q7Z794 578 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 EGFL6Q8IUX8 553 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 PAQR4Q8N4S7 273 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 SLC30A7Q8NEW0 376 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 SNX33Q8WV41 574 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 SLAMF6Q96DU3 332 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 ABHD6Q9BV23 337 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 MROQ9BYG7 248 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 OR2H1Q9GZK4 316 aa14.61□□□□□ -0.07
PRPF40A-204ENST00000450303 HDHD2Q9H0R4 259 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms