RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CD37P11049 281 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 SPINK2P20155 84 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 CDAP32320 146 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 RAB5CP51148 216 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 MFGE8Q08431 387 aaPredicted RBP11.15□□□□□ -0.62
UBE3B-204ENST00000449510 AWAT1Q58HT5 328 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 VWA2Q5GFL6 755 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TSPO2Q5TGU0 170 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 LHX8Q68G74 356 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 OR2A2Q6IF42 318 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 C20orf196Q8IYI0 205 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 SGCZQ96LD1 299 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 CNTD2Q9H8S5 307 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF160Q9HCG1 818 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 PDE7BQ9NP56 450 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 MRPS18BQ9Y676 258 aaKnown RBP11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TDRD15B5MCY1 1934 aaKnown RBP11.15□□□□□ -0.62
UBE3B-204ENST00000449510 A0A1W2PP11 408 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TCRBV21S2A2A0A5A6 115 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TSTD3H0UI37 97 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 SKP2Q13309 424 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF74Q16587 644 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 C21orf62-AS1Q17RA5 79 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 LPCAT3Q6P1A2 487 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 OR5AP2Q8NGF4 316 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 RHOVQ96L33 236 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
UBE3B-204ENST00000449510 VSTM2BA6NLU5 285 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 ICOSLGO75144 302 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 OR2A4O95047 310 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 CHATP28329 748 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 TAF9Q16594 264 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 STPG1Q5TH74 334 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 OTOSQ8NHW6 89 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 OR2A7Q96R45 310 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 OR2A5Q96R48 311 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 DMRTA2Q96SC8 542 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.63
UBE3B-204ENST00000449510 FAM60AQ9NP50 221 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 MMP25Q9NPA2 562 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 PLEK2Q9NYT0 353 aa11.15□□□□□ -0.63
UBE3B-204ENST00000449510 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF724A8MTY0 619 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 S100A8P05109 93 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF43P17038 809 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF41P51814 821 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RAB38P57729 211 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 OR6S1Q8NH40 331 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 POM121Q96HA1 1249 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 SLCO5A1Q9H2Y9 848 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 SNRNP200O75643 2136 aaKnown RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 OR2M5A3KFT3 312 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CYB5BO43169 146 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 PHF1O43189 567 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 PNPP00491 289 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 IFNA4P05014 189 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 FABP4P15090 132 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RPS11P62280 158 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RAB11AP62491 216 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RAP1AP62834 184 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 DEFB133Q30KQ1 61 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CA13Q8N1Q1 262 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 STT3BQ8TCJ2 826 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 TSPAN32Q96QS1 320 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 OR8B4Q96RC9 309 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 NICN1Q9BSH3 213 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 REG4Q9BYZ8 158 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CST7O76096 145 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 OR7C1O76099 320 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CRHP06850 196 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CTSBP07858 339 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 TESK1Q15569 626 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 GUK1Q16774 197 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 PRICKLE4Q2TBC4 344 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF425Q6IV72 752 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-204ENST00000449510 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 CLEC1AQ8NC01 280 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 TMEM234Q8WY98 164 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 LAT2Q9GZY6 243 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 OR5AC2Q9NZP5 309 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 KPTNQ9Y664 436 aa11.14□□□□□ -0.63
UBE3B-204ENST00000449510 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
UBE3B-204ENST00000449510 H0YIG0 161 aa11.13□□□□□ -0.63
UBE3B-204ENST00000449510 MBTPS2O43462 519 aa11.13□□□□□ -0.63
UBE3B-204ENST00000449510 IGKV1D-16P01601 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms