RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 F5P12259 2224 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PPQ1 181 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PHOX2AO14813 284 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 DSCR3O14972 297 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ADH4P08319 380 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 DEFA4P12838 97 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CTRB1P17538 263 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 NAT1P18440 290 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PGFP49763 221 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 RAG2P55895 527 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 DHODHQ02127 395 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 RAB35Q15286 201 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 SHBQ15464 509 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 C1QTNF12Q5T7M4 302 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CTRB2Q6GPI1 263 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 SPNS2Q8IVW8 549 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 OR5M1Q8NGP8 315 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ORAI1Q96D31 301 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CMBLQ96DG6 245 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ARSGQ96EG1 525 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CNRIP1Q96F85 164 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CIB3Q96Q77 187 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PBOV1Q9GZY1 135 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 TMPRSS5Q9H3S3 457 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM30AQ9NV96 361 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 SLC23A1Q9UHI7 598 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 NINQ8N4C6 2090 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 J3QR89 54 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 AQP7O14520 342 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CHEK1O14757 476 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 XRCC2O43543 280 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 WNT11O96014 354 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 IGHV3-9P01782 118 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 TM4SF4P48230 202 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ADPRHP54922 357 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF77Q15935 545 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 SLC16A12Q6ZSM3 486 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 SLCO1C1Q9NYB5 712 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CYB5R1Q9UHQ9 305 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PPP1R3CQ9UQK1 317 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 C4AP0C0L4 1744 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 NHSQ6T4R5 1651 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 FAM221AA4D161 298 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 LRRC30A6NM36 301 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 NDUFB6O95139 128 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 AGERQ15109 404 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 DND1Q8IYX4 353 aaKnown RBP7.05□□□□□ -1.28
NEDD9-204ENST00000448183 EDAQ92838 391 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 HGDQ93099 445 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 TOLLIPQ9H0E2 274 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 MED29Q9NX70 200 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 IL20Q9NYY1 176 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 LAMP3Q9UQV4 416 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 CBY1Q9Y3M2 126 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SH2D1BO14796 132 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CLEC3BP05452 202 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SELEP16581 610 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM11P17152 192 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GALP22466 123 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CD27P26842 260 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CSF2RBP32927 897 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PNLIPRP3Q17RR3 467 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 KIRREL2Q6UWL6 708 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CA13Q8N1Q1 262 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SIRT6Q8N6T7 355 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GPR119Q8TDV5 335 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SLC39A7Q92504 469 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 MAGT1Q9H0U3 335 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RGPD5Q99666 1765 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CHD4Q14839 1912 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 NUP205Q92621 2012 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SERPINE3A8MV23 424 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 IDSB3KWA1 339 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RNASEK-C17orf49H0YIS7 233 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 YKT6O15498 198 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 FZD6O60353 706 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RRASP10301 218 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ST6GAL1P15907 406 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 NQO2P16083 231 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OR1D5P58170 312 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 DMWDQ09019 674 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 OR8G1Q15617 311 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 VAMP3Q15836 100 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 LRRTM1Q86UE6 522 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 CDC20BQ86Y33 519 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ADGRG3Q86Y34 549 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF573Q86YE8 665 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 KLHDC1Q8N7A1 406 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SPPL3Q8TCT6 385 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 C11orf40Q8WZ69 217 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 DOK1Q99704 481 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 ARHGDIGQ99819 225 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 RBM38Q9H0Z9 239 aaKnown RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 R3HDMLQ9H3Y0 253 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 SIRT5Q9NXA8 310 aa7.04□□□□□ -1.28
NEDD9-204ENST00000448183 PLEKHB1Q9UF11 243 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-204ENST00000448183 GDF2Q9UK05 429 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms