RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 GPR78Q96P69 363 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 GON7Q9BXV9 100 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 R4GN57 208 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 HIST1H1CP16403 213 aaKnown RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SOX18P35713 384 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 NPBWR1P48145 328 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 CCL4L1Q8NHW4 92 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 LIN28AQ9H9Z2 209 aaKnown RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 AIPO00170 330 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SOCS6O14544 535 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 LCMT2O60294 686 aaKnown RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SELENOFO60613 162 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 CHRNB1P11230 501 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 OPRL1P41146 370 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 NPY4RP50391 375 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 COL13A1Q5TAT6 717 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 B3GNTL1Q67FW5 361 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 OR5AS1Q8N127 324 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 GPX8Q8TED1 209 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 FAM122AQ96E09 287 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 DDA1Q9BW61 102 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 CDCA4Q9BXL8 241 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 PBOV1Q9GZY1 135 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 FBXO8Q9NRD0 319 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 GDF2Q9UK05 429 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 LRRC37AA6NMS7 1700 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 T-ENOLP0DO92 83 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF17P17021 662 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 PTAFRP25105 342 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SVBPQ8N300 66 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 DUS3LQ96G46 650 aaKnown RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SERPINF1P36955 418 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 NKX2-1P43699 371 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SLC9A3R2Q15599 337 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 OR2W3Q7Z3T1 314 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 D2HGDHQ8N465 521 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 CTSFQ9UBX1 484 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 NCR1O76036 304 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 JTBO76095 146 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF75AQ96N20 296 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 A0A1W2PNR3 127 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 MEIOCA2RUB1 952 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ZAR1LA6NP61 321 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 ATF1P18846 271 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 TIGD3Q6B0B8 471 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 SLCO4A1Q96BD0 722 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 EMC6Q9BV81 110 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 GPR173Q9NS66 373 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 TCFL5Q9UL49 500 aa7.72□□□□□ -1.17
PTPN3-204ENST00000446349 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 SPDEFO95238 335 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 APOC3P02656 99 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 TGM1P22735 817 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 RAB1AP62820 205 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 KRBOX4Q5JUW0 171 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 SLC38A6Q8IZM9 456 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 PINX1Q96BK5 328 aaKnown RBP7.71□□□□□ -1.17
PTPN3-204ENST00000446349 MED30Q96HR3 178 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 SOX7Q9BT81 388 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 TMEM231Q9H6L2 316 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 EMC7Q9NPA0 242 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 NTNG1Q9Y2I2 539 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 MN1Q10571 1320 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-204ENST00000446349 MT-ND4P03905 459 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 CEACAM16Q2WEN9 425 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 OR2G6Q5TZ20 316 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 C17orf47Q8NEP4 570 aa7.71□□□□□ -1.17
PTPN3-204ENST00000446349 PRKRAO75569 313 aaKnown RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 MPC1Q9Y5U8 109 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 TRAV1-2A0A0B4J238 106 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 GUSBP08236 651 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 UBE2G1P62253 170 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 INSM1Q01101 510 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 AGERQ15109 404 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 FAM199XQ6PEV8 388 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 DYNC2LI1Q8TCX1 351 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 CT55Q8WUE5 264 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 NIPSNAP3BQ9BS92 247 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 HSD17B6O14756 317 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 IL9P15248 144 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 AGFG1P52594 562 aaKnown RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 RPS25P62851 125 aaKnown RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 DUSP2Q05923 314 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 TBPL2Q6SJ96 375 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 OR1L3Q8NH93 324 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 MS4A5Q9H3V2 200 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 OR5V1Q9UGF6 321 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 XIRP1Q702N8 1843 aaKnown RBP7.71□□□□□ -1.18
PTPN3-204ENST00000446349 A0A0B4J203 849 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 HPNP05981 417 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 FOXF1Q12946 379 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 PARP16Q8N5Y8 322 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 BHLHE23Q8NDY6 225 aa7.71□□□□□ -1.18
PTPN3-204ENST00000446349 OR10P1Q8NGE3 313 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms