RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MSGN1	A6NI15	193 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	SNRPGP15	A8MWD9	76 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	GP1BA	P07359	652 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	TMEM11	P17152	192 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	RCC1	P18754	421 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	PAPD4	Q6PIY7	484 aa	Known RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	LANCL3	Q6ZV70	420 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	OR51F2	Q8NH61	342 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	CPNE4	Q96A23	557 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	G6PC3	Q9BUM1	346 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	TLNRD1	Q9H1K6	362 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	PLEKHA1	Q9HB21	404 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	MRPS33	Q9Y291	106 aa	Known RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	IGHV5-51	A0A0C4DH38	117 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ZNF208	O43345	1280 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ACTL6A	O96019	429 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	CPN1	P15169	458 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ZNF823	P16415	610 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	POU3F1	Q03052	451 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	PEA15	Q15121	130 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	EBP	Q15125	230 aa	Known RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	NSDHL	Q15738	373 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	TCEAL6	Q6IPX3	200 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	BRICD5	Q6PL45	260 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ATG4D	Q86TL0	474 aa	Predicted RBP	11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ZNF248	Q8NDW4	579 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	LMX1A	Q8TE12	382 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	ASB5	Q8WWX0	329 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	GPER1	Q99527	375 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	POTEKP	Q9BYX7	375 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	CHRD	Q9H2X0	955 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	CNTD2	Q9H8S5	307 aa		11.22	□□□□□ -0.61
DDR1-238	ENST00000446312	TRIOBP	Q9H2D6	2365 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	SHANK1	Q9Y566	2161 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	EPOP	A6NHQ4	379 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	RFPL4A	A6NLU0	287 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	RFPL4AL1	F8VTS6	287 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	PHYH	O14832	338 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	STK17B	O94768	372 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	IL5	P05113	134 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	CNR1	P21554	472 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	RBM34	P42696	430 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	ZNF684	Q5T5D7	378 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	ETFRF1	Q6IPR1	90 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	RTL10	Q7L3V2	364 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	C19orf47	Q8N9M1	422 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	OTOS	Q8NHW6	89 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	ELSPBP1	Q96BH3	223 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	MISP3	Q96FF7	219 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	GGACT	Q9BVM4	153 aa		11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	METTL8	Q9H825	291 aa	Known RBP	11.21	□□□□□ -0.61
DDR1-238	ENST00000446312	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	TMEM212	A6NML5	194 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	ARPC3	O15145	178 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	TNFSF12	O43508	249 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	GPR3	P46089	330 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	TAS2R19	P59542	299 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	DMWD	Q09019	674 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	PDCD1	Q15116	288 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF585A	Q6P3V2	769 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	ATG101	Q9BSB4	218 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.21	□□□□□ -0.62
DDR1-238	ENST00000446312	UBQLN4	Q9NRR5	601 aa		11.21	□□□□□ -0.62
DDR1-238	ENST00000446312		A0A087X0M5	115 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312		A0A1B0GX30	115 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	GPR89A	B7ZAQ6	455 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	AK1	P00568	194 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	TNF	P01375	233 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	GPR89B	P0CG08	455 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	NME1	P15531	152 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	EN2	P19622	333 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	RBP2	P50120	134 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	AIMP2	Q13155	320 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	ARFRP1	Q13795	201 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	PPA1	Q15181	289 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	PRTG	Q2VWP7	1150 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	AWAT2	Q6E213	333 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	SLC18B1	Q6NT16	456 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	ISOC2	Q96AB3	205 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	TMPRSS13	Q9BYE2	586 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	RNF222	A6NCQ9	220 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	SLC17A2	O00624	439 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF354A	O60765	605 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	H2AFB1	P0C5Y9	115 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	MUC1	P15941	1255 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	CD1C	P29017	333 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	S100A2	P29034	98 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	ARL4D	P49703	201 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	PPIA	P62937	165 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	PLCXD2	Q0VAA5	305 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	C11orf87	Q6NUJ2	197 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	LINC00114	Q6XXX2	140 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	PGAP1	Q75T13	922 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF615	Q8N8J6	731 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	TMEM104	Q8NE00	496 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	C14orf79	Q96F83	325 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	SFXN1	Q9H9B4	322 aa		11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	MEX3A	A1L020	520 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-238	ENST00000446312	WIPF3	A6NGB9	483 aa		11.2	□□□□□ -0.62

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