RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 OR51E1Q8TCB6 317 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 WFDC5Q8TCV5 224 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 SIRT5Q9NXA8 310 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 COL18A1P39060 1754 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 LINC01553A4QN01 128 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 DVL1O14640 695 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 LPAL2Q16609 132 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 C9orf152Q5JTZ5 239 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 C9orf62Q8N4C0 152 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 PRRX2Q99811 253 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 C19orf43Q9BQ61 176 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 FBXO4Q9UKT5 387 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 HS3ST3A1Q9Y663 406 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 SLCO1B1Q9Y6L6 691 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 H3BNC9 293 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 BCAT2O15382 392 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 HSBP1O75506 76 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 ATF1P18846 271 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 USF1P22415 310 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 GDF1P27539 372 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 PXNP49023 591 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 LBHQ53QV2 105 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 RTN4IP1Q8WWV3 396 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 RLN3Q8WXF3 142 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 FAM234AQ9H0X4 552 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 WSB2Q9NYS7 404 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 MMACHCQ9Y4U1 282 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 TRAPPC1Q9Y5R8 145 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 TMEM218A2RU14 115 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 SLC17A2O00624 439 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 TNFRSF10CO14798 259 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 GLSO94925 669 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 RBP2P50120 134 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 ZNF77Q15935 545 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 MAMSTRQ6ZN01 415 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 MUC20Q8N307 709 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-203ENST00000445220 SLC39A7Q92504 469 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
SHANK3-203ENST00000445220 EIF4E2O60573 245 aaKnown RBP16.89■□□□□ 0.3
SHANK3-203ENST00000445220 EIF1BO60739 113 aaKnown RBP16.89■□□□□ 0.3
SHANK3-203ENST00000445220 NXPH2O95156 264 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 PRR35P0CG20 571 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 PTTG1IPP53801 180 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 GUCA2AQ02747 115 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 C21orf62-AS1Q17RA5 79 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 C19orf35Q6ZS72 473 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 GRINAQ7Z429 371 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 FAM210BQ96KR6 192 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 PDFQ9HBH1 243 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 CHST11Q9NPF2 352 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.3
SHANK3-203ENST00000445220 ABHD16AO95870 558 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 PIGPP57054 158 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 B3GNTL1Q67FW5 361 aaPredicted RBP16.89■□□□□ 0.29
SHANK3-203ENST00000445220 ARIH2OSQ8N7S6 290 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 CTSFQ9UBX1 484 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 SLC6A1P30531 599 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 TAS2R45P59539 299 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 HSF1Q00613 529 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF628Q5EBL2 1059 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 SLAMF6Q96DU3 332 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 MS4A10Q96PG2 267 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 SEMA6CQ9H3T2 930 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 LYRM4Q9HD34 91 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 DHODHQ02127 395 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 TCTEX1D1Q8N7M0 179 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 CORO2AQ92828 525 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 ORAI1Q96D31 301 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 EDEM2Q9BV94 578 aa16.89■□□□□ 0.29
SHANK3-203ENST00000445220 DDX60LQ5H9U9 1706 aaKnown RBP16.89■□□□□ 0.29
SHANK3-203ENST00000445220 XKRY2A2RUG3 117 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 HNF1AP20823 631 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 LIM2P55344 173 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 RPL7L1Q6DKI1 246 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MRM1Q6IN84 353 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 SIRT6Q8N6T7 355 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 KIR3DX1Q9H7L2 352 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 GATCO43716 136 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 HSD17B7P56937 341 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 TRMT12Q53H54 448 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 SYT13Q7L8C5 426 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 CAMKMTQ7Z624 323 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MS4A6EQ96DS6 147 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 TINAGL1Q9GZM7 467 aaPredicted RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 FOXJ3Q9UPW0 622 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 SPINT2O43291 252 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 IGHEP01854 428 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 METRNLQ641Q3 311 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MARCH3Q86UD3 253 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 USB1Q9BQ65 265 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 UQCC1Q9NVA1 299 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 RCL1Q9Y2P8 373 aaKnown RBP16.88■□□□□ 0.29
SHANK3-203ENST00000445220 ASPDHA6ND91 283 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MBTPS2O43462 519 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 ICAM2P13598 275 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 RAB18Q9NP72 206 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 MTFP1Q9UDX5 166 aa16.88■□□□□ 0.29
SHANK3-203ENST00000445220 R4GMQ9 66 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms