RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PCMT1P22061 227 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 PAICSP22234 425 aaKnown RBP9.12□□□□□ -0.95
SF3A1-203ENST00000444440 TNFSF4P23510 183 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 POU1F1P28069 291 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 FMO3P31513 532 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 GRK5P34947 590 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SLC6A9P48067 706 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 ENTPD1P49961 510 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 PRKXP51817 358 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF92Q03936 586 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SLC3A1Q07837 685 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 ECH1Q13011 328 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 GLYATL3Q5SZD4 288 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 DCAF12L2Q5VW00 463 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 PRAMEF6Q5VXH4 476 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SLC27A4Q6P1M0 643 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SHQ1Q6PI26 577 aaKnown RBP9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SPATC1Q76KD6 591 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 C1QL2Q7Z5L3 287 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-203ENST00000444440 C19orf18Q8NEA5 215 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 DEFB108BQ8NET1 73 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 OR5K1Q8NHB7 308 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF582Q96NG8 517 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-203ENST00000444440 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 KIF17Q9P2E2 1029 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 AP4S1Q9Y587 144 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 A0A0G2JMP0 313 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 A0A0X1KG70 313 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF593O00488 134 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-203ENST00000444440 TIPRLO75663 272 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 OSMP13725 252 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 ANPEPP15144 967 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 EPHA1P21709 976 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 PRKACGP22612 351 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 FASP25445 335 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 SLC25A1P53007 311 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 RAD23AP54725 363 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 TPTEP56180 551 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 PAX2Q02962 417 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 MPPED2Q15777 294 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM155Q4W5P6 130 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 OR4M2Q8NGB6 313 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 OR6K6Q8NGW6 343 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 C22orf15Q8WYQ4 148 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 SLAMF6Q96DU3 332 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 DUS3LQ96G46 650 aaKnown RBP9.11□□□□□ -0.95
SF3A1-203ENST00000444440 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 PPP1R3EQ9H7J1 279 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM165Q9HC07 324 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM100Q9NV29 134 aa9.11□□□□□ -0.95
SF3A1-203ENST00000444440 POLR3KQ9Y2Y1 108 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-203ENST00000444440 CD300LBA8K4G0 201 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 A8MXK9 166 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 G3V2T6 193 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 FAM20BO75063 409 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 FCN3O75636 299 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 WNT2P09544 360 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 CA6P23280 308 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 MDH2P40926 338 aaKnown RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 CD200P41217 278 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 GINS1Q14691 196 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 ATP6AP1Q15904 470 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 KLHL12Q53G59 568 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 KLF17Q5JT82 389 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 TEX30Q5JUR7 227 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 LYPD2Q6UXB3 125 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 PGAP1Q75T13 922 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 ASRGL1Q7L266 308 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 PRSS45Q7RTY3 260 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 DPY19L4Q7Z388 723 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 PEG10Q86TG7 708 aaKnown RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 TIGD4Q8IY51 512 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 BBS1Q8NFJ9 593 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 DACT3Q96B18 629 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 OTULINQ96BN8 352 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 SLC6A7Q99884 636 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM246Q9BRR3 403 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 COPS4Q9BT78 406 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 C7orf69Q9H7B7 122 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 NTN4Q9HB63 628 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 CENPMQ9NSP4 180 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 UFSP2Q9NUQ7 469 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF319Q9P2F9 582 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 KLHDC2Q9Y2U9 406 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 N6AMT1Q9Y5N5 214 aa9.1□□□□□ -0.95
SF3A1-203ENST00000444440 SOX21Q9Y651 276 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF878C9JN71 531 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 PRR23D1E9PI22 279 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 C3orf80F5H4A9 247 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 J3QLI3 93 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 SURF4O15260 269 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 SELENOFO60613 162 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 FOXH1O75593 365 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms