RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 TP53BP1Q12888 1972 aaPredicted RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 A0A087WV48 116 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 A0A0A6YYJ9 748 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 RAMP1O60894 148 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 LIFP15018 202 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 THBS2P35442 1172 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ATP1B3P54709 279 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 EIF3IQ13347 325 aaKnown RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 CNN3Q15417 329 aaKnown RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 SF3B4Q15427 424 aaKnown RBP eCLIP9.42□□□□□ -0.9
CALD1-210ENST00000443197 LINC01590Q5TEZ4 76 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ZNF468Q5VIY5 522 aaPredicted RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 PGLYRP3Q96LB9 341 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 HES7Q9BYE0 225 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ANKRD30BLA7E2S9 258 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 H3BMH7 237 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 SLC17A2O00624 439 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 PLA2G10O15496 165 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 LYPD3O95274 346 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ACSM4P0C7M7 580 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ZNF44P15621 663 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 PI3P19957 117 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 MST1P26927 711 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 TAF9Q16594 264 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 DCAF10Q5QP82 559 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 SLC26A10Q8NG04 563 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 KCNE4Q8WWG9 221 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 IL1F10Q8WWZ1 152 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 HAVCR1Q96D42 359 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 OR2M2Q96R28 347 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 IFNA7P01567 189 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 HLA-HP01893 362 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 COX6A1P12074 109 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ZNF32P17041 273 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 SRD5A2P31213 254 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 CD96P40200 585 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 RFX2P48378 723 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 IDH3GP51553 393 aaPredicted RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 MLF1P58340 268 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 AIMP2Q13155 320 aaKnown RBP9.42□□□□□ -0.9
CALD1-210ENST00000443197 PCK2Q16822 640 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 ELFN2Q5R3F8 820 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 TMEM53Q6P2H8 277 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 SMIM4Q8WVI0 70 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 TRIB1Q96RU8 372 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 PTDSS2Q9BVG9 487 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 METTL9Q9H1A3 318 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 TIMM10BQ9Y5J6 103 aa9.42□□□□□ -0.9
CALD1-210ENST00000443197 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 SLC33A1O00400 549 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 GALP22466 123 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 RAD52P43351 418 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 MEOX1P50221 254 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 ZNF684Q5T5D7 378 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 HACD4Q5VWC8 232 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 GTPBP8Q8N3Z3 284 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 SPERTQ8NA61 448 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 OR56B1Q8NGI3 324 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 CMSS1Q9BQ75 279 aaKnown RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 RABL2AQ9UBK7 228 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 RABL2BQ9UNT1 228 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 PMS2P1A4D2B8 440 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 KLK10O43240 276 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 SC5DO75845 299 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 RLN2P04090 185 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 IFI6P09912 130 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 PTBP1P26599 531 aaKnown RBP eCLIP9.41□□□□□ -0.95e-7■■□□□ 12.8
CALD1-210ENST00000443197 NPY4RP50391 375 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 SPATA46Q5T0L3 261 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 FAM122BQ7Z309 247 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 FJX1Q86VR8 437 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 OR6X1Q8NH79 312 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 OIT3Q8WWZ8 545 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 UPRTQ96BW1 309 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 PLSCR3Q9NRY6 295 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 MRPL22Q9NWU5 206 aaKnown RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 FOXJ2Q9P0K8 574 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 ZSCAN5BA6NJL1 495 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 F5H0A9 414 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 I3L521 148 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 HPP00738 406 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 HOXB5P09067 269 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 OPRM1P35372 400 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 OR52W1Q6IF63 320 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 C12orf45Q8N5I9 185 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 OR52B4Q8NGK2 314 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 OR6F1Q8NGZ6 308 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 SNAPC3Q92966 411 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
CALD1-210ENST00000443197 PRRT1Q99946 306 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 KCNIP3Q9Y2W7 256 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 PCNX2A6NKB5 2137 aa9.41□□□□□ -0.9
CALD1-210ENST00000443197 B4E171 279 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms