RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ZXDBP98169 803 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ELOA3BQ3SY89 546 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 PYCR3Q53H96 274 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 C22orf42Q6IC83 251 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF367Q7RTV3 350 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ELOA3Q8NG57 546 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 OR4D9Q8NGE8 314 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 OR10V1Q8NGI7 309 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 OR56B4Q8NH76 319 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 SMARCD1Q96GM5 515 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 HES2Q9Y543 173 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 C1orf196B1AJZ1 125 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CLDN5O00501 218 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 PPIHO43447 177 aaKnown RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF286BP0CG31 522 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF17P17021 662 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 KDELR1P24390 212 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 FAM102AQ5T9C2 384 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 TEX261Q6UWH6 196 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF782Q6ZMW2 699 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 DOLPP1Q86YN1 238 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 OR5K1Q8NHB7 308 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 TMEM171Q8WVE6 324 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 REEP6Q96HR9 211 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 AP4S1Q9Y587 144 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 MATN1P21941 496 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ADORA2AP29274 412 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 SLC19A1P41440 591 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CTXN1P60606 82 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 MXD1Q05195 221 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 STUMQ69YW2 141 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 TMEM200BQ69YZ2 307 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF613Q6PF04 617 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CST9LQ9H4G1 147 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 PACSIN3Q9UKS6 424 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 FAAHO00519 579 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 DANCRP0C864 163 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 HRH2P25021 359 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 NMBRP28336 390 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 GRPRP30550 384 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 RAB10P61026 200 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 CDK5Q00535 292 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF235Q14590 738 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 SHHQ15465 462 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 CCSMST1Q4G0I0 132 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 FAM71E1Q6IPT2 247 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 SSX6Q7RTT6 188 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF488Q96MN9 340 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 PGLYRP2Q96PD5 576 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 FBXL2Q9UKC9 423 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 TIMM13Q9Y5L4 95 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-206ENST00000441438 BPTFQ12830 3046 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 UGT2B17O75795 530 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 GIPP09681 153 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-206ENST00000441438 ARL4AP40617 200 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 TPI1P60174 286 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 PRKCDQ05655 676 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 LDLRAD3Q86YD5 345 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 TDHQ8IZJ6 230 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 PACRGLQ8N7B6 248 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 MBD3L2Q8NHZ7 208 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-206ENST00000441438 DDOQ99489 341 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF385DQ9H6B1 395 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 STEAP1Q9UHE8 339 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 TIMM10BQ9Y5J6 103 aa9.29□□□□□ -0.92
SYNE2-206ENST00000441438 MYOCOSA0A1B0GUC4 107 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 ANKUB1A6NFN9 424 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 HLA-AP01891 365 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 HIST1H1CP16403 213 aaKnown RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF155Q12901 538 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GAGE5Q13069 117 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GAGE6Q13070 117 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 LINC00299Q6ZSB3 139 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 Q6ZSR9 355 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 ZCCHC23Q6ZST2 131 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 GLT6D1Q7Z4J2 308 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 UCN3Q969E3 161 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 PYURFQ96I23 114 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 OR52E6Q96RD3 313 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 IGKV6D-21A0A0A0MT36 114 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 RPS10-NUDT3A0A1W2PQS6 291 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 SLC22A20A6NK97 555 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 TIMP1P01033 207 aa9.28□□□□□ -0.92
SYNE2-206ENST00000441438 MBPP02686 304 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 IL6RP08887 468 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-206ENST00000441438 PVALBP20472 110 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms