RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IGKV1D-42A0A075B6H8 117 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGHV4OR15-8A0A075B7B6 117 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAV1-2A0A0B4J238 106 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1B0GX78 115 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PQD3 144 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1W2PRV1 198 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MEIOCA2RUB1 952 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM172BPA6NC97 362 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM221A6NGB7 291 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 OOEPA6NGQ2 149 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 C5orf52A6NGY3 159 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 B4DXG7 233 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRN3E7EW58 273 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 H3BMH7 237 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 BLOC1S5-TXNDC5H3BN57 136 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PDCD5O14737 125 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TOX3O15405 576 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLA2G10O15496 165 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SSX4O60224 188 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRKNO60260 465 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GPRIN2O60269 458 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CDC40O60508 579 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TSPAN2O60636 221 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SC5DO75845 299 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GATBO75879 557 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CCNKO75909 580 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ARL6IP5O75915 188 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TXNDC12O95881 172 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PNPP00491 289 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RENP00797 406 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 HLA-DQB1P01920 261 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGKV3-11P04433 115 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 KRT8P05787 483 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GYPBP06028 91 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 UMODP07911 640 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CD14P08571 375 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TACSTD2P09758 323 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RNF224P0DH78 156 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAPPC2P0DI81 140 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRAPPC2BP0DI82 140 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRKAR1AP10644 381 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GP1BBP13224 206 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 FOLR1P15328 257 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SPI1P17947 270 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ELK1P19419 428 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PGCP20142 388 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAB3BP20337 219 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NPR2P20594 1047 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 BCKDHBP21953 392 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CXCR1P25024 350 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 EDNRAP25101 427 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 HLA-DMAP28067 261 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 IL12BP29460 328 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RBMS1P29558 406 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TALDO1P37837 337 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 DDOSTP39656 456 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NAA10P41227 235 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPS5P46782 204 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CXCL12P48061 93 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 INPP1P49441 399 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 GDI2P50395 445 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CCR4P51679 360 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NR0B1P51843 470 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 HCCSP53701 268 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPS4XP62701 263 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PITPNAQ00169 270 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF117Q03924 483 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLCXD2Q0VAA5 305 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPL28Q13084 256 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 INSL4Q14641 139 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MELKQ14680 651 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 QPRTQ15274 297 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SF3A2Q15428 464 aaKnown RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NSDHLQ15738 373 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CD226Q15762 336 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 EFNB3Q15768 340 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 KCNJ8Q15842 424 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 VWA2Q5GFL6 755 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 C1orf189Q5VU69 101 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RSBN1Q5VWQ0 802 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SHEQ5VZ18 495 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 DMKNQ6E0U4 476 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 LEG1Q6P5S2 330 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 WDR74Q6RFH5 385 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 CBLN3Q6UW01 205 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 UNQ9370/PRO34162Q6UXP9 181 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 APOOLQ6UXV4 268 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SSX6Q7RTT6 188 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC16A9Q7RTY1 509 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRSS42Q7Z5A4 293 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 NANOGNBQ7Z5D8 188 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RABEPKQ7Z6M1 372 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 MARCH3Q86UD3 253 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRC28Q86X40 367 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 TIGD4Q8IY51 512 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRR22Q8IZ63 422 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 RDH10Q8IZV5 341 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 Q8N402 240 aa3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 Q8N9G6 341 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRC75AQ8NAA5 344 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms