RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 V9GYH0 126 aa12.73□□□□□ -0.37
TNFRSF1A-204ENST00000440083 TRBV5-7A0A0A0MS05 114 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 H3BSH0 61 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 MSTNO14793 375 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PIN1P1O15428 100 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 SRSF10O75494 262 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 KRT33AO76009 404 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ANXA2P07355 339 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 CCKARP32238 428 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PSMD7P51665 324 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 FBXL19-AS1Q494R0 122 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 SNX29P2Q8IUI4 249 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 LYSMD2Q8IV50 215 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 RDH10Q8IZV5 341 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 CENPSQ8N2Z9 138 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 TMEM106AQ96A25 262 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 SRRQ9GZT4 340 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 BRD7Q9NPI1 651 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 V9GY05 133 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 CRYBG3Q68DQ2 2970 aa12.72□□□□□ -0.37
TNFRSF1A-204ENST00000440083 hCG_2014768A0A024R1R8 64 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 LOC107986453A0A1B0GWG9 222 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ZNF724A8MTY0 619 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 EPXP11678 715 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 IGFBP2P18065 325 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ATF1P18846 271 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.371e-7■■■□□ 14.7
TNFRSF1A-204ENST00000440083 MMP16P51512 607 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 MRPS34P82930 218 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 FAM27E3Q08E93 113 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 IL18Q14116 193 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 SAMD12Q8N8I0 201 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ACBD4Q8NC06 268 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 GJC3Q8NFK1 279 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 OR10S1Q8NGN2 331 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 OR10AC1Q8NH08 325 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 HTRA1Q92743 480 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 ALKBH3Q96Q83 286 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 MRI1Q9BV20 369 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 GP6Q9HCN6 339 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PLSCR4Q9NRQ2 329 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 PARPBPQ9NWS1 579 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 MALT1Q9UDY8 824 aa12.71□□□□□ -0.37
TNFRSF1A-204ENST00000440083 CELSR2Q9HCU4 2923 aa12.71□□□□□ -0.38
TNFRSF1A-204ENST00000440083 A0A1B0GVI7 797 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 AIPO00170 330 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 RER1O15258 196 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ISG15P05161 165 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 COX6B1P14854 86 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 THBS2P35442 1172 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 MAGEB1P43366 347 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 OR3A2P47893 321 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CX3CR1P49238 355 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PRKXP51817 358 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 IFITM3Q01628 133 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TSC22D1Q15714 1073 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 HES5Q5TA89 166 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 STAC2Q6ZMT1 411 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SYT9Q86SS6 491 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 COMMD2Q86X83 199 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 POC5Q8NA72 575 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 NABP1Q96AH0 204 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ORAI1Q96D31 301 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 COX4I2Q96KJ9 171 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PBOV1Q9GZY1 135 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SLCO5A1Q9H2Y9 848 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CRLF2Q9HC73 371 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
TNFRSF1A-204ENST00000440083 IFITM5A6NNB3 132 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 P2RY10O00398 339 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 APOA1P02647 267 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 APOC1P02654 83 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms