RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ACTR1AP61163 376 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF763Q0D2J5 394 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 IL24Q13007 206 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 PDK3Q15120 406 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 IRF4Q15306 451 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 NRF1Q16656 503 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 SFT2D3Q587I9 215 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 C1orf220Q5T0J3 134 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 MLIPQ5VWP3 458 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 C11orf71Q6IPW1 123 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF620Q6ZNG0 422 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 TIFABQ6ZNK6 161 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 NLRP9Q7RTR0 991 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 DHDDSQ86SQ9 333 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 TMEM61Q8N0U2 210 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KIR2DL5AQ8N109 375 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ARL6IP6Q8N6S5 226 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 LRRC52Q8N7C0 313 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ARIH2OSQ8N7S6 290 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 NKAPP1Q8N9T2 125 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR56A4Q8NGH8 313 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KIR2DL5BQ8NHK3 375 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC22A8Q8TCC7 542 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 RXFP2Q8WXD0 754 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 UFD1Q92890 307 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 C10orf35Q96D05 121 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 C9orf72Q96LT7 481 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 TCEANC2Q96MN5 208 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF285Q96NJ3 590 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 PSKH2Q96QS6 385 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 COPS8Q99627 209 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 CCT7Q99832 543 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ROGDIQ9GZN7 287 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 YY1AP1Q9H869 796 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 MMP26Q9NRE1 261 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KCNIP3Q9Y2W7 256 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 FADS3Q9Y5Q0 445 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 CACNA1CQ13936 2221 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 UNC13CQ8NB66 2214 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 GOLGA6L7A0A1B0GV03 622 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 A0A1B0GVL5 298 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM92AA1XBS5 289 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 PINLYPA6NC86 204 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 A6NDX4 124 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 E7EWF7 191 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 LOC110117498-PIK3R3F6TDL0 507 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 AGPAT2O15120 278 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 HCRTR1O43613 425 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM189A1O60320 539 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 PALMO75781 387 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CTSLP07711 333 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CHTF8P0CG12 524 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 DBTP11182 482 aaKnown RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 NR2C1P13056 603 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ICAM2P13598 275 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 WARSP23381 471 aaKnown RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 AK4P27144 223 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 DDOSTP39656 456 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ACTR1BP42025 376 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 GRIA1P42261 906 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 GLP1RP43220 463 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 KIR2DS4P43632 304 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CCT3P49368 545 aaKnown RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ACOT2P49753 483 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 GFERP55789 205 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 SH3BGRP55822 239 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 TNNC1P63316 161 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CDK16Q00536 496 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ASPHQ12797 758 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 PDIA2Q13087 525 aaKnown RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CHIT1Q13231 466 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 NCF4Q15080 339 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ATP6AP1Q15904 470 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 KLHL40Q2TBA0 621 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC25A35Q3KQZ1 300 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF658BQ4V348 819 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 LRRC23Q53EV4 343 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 BOLA3Q53S33 107 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 GPR157Q5UAW9 335 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 C6orf89Q6UWU4 347 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ACP7Q6ZNF0 438 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 PRSS41Q7RTY9 318 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC13A5Q86YT5 568 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ARHGAP18Q8N392 663 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM71E2Q8N5Q1 922 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF433Q8N7K0 673 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 Q8N9W7 124 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 LINC01555Q8NAE3 123 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR10G3Q8NGC4 313 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ERMNQ8TAM6 284 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 MAGEE2Q8TD90 523 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 RNF139Q8WU17 664 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF799Q96GE5 643 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 OXGR1Q96P68 337 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 NRTNQ99748 197 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 CRACR2AQ9BSW2 395 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 C20orf85Q9H1P6 137 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 SIAEQ9HAT2 523 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 373.9 ms