RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGKV3D-15A0A087WSY6 115 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 OR5H15A6NDH6 313 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 SULT1C2O00338 296 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 NME2P1O60361 137 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 NME2P22392 152 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 PRSS3P35030 304 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 HYAL4Q2M3T9 481 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 CCDC54Q8NEL0 328 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 OR52N4Q8NGI2 321 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 ZNF837Q96EG3 531 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-216ENST00000437340 PGAM5Q96HS1 289 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 NKX3-1Q99801 234 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-216ENST00000437340 GHITMQ9H3K2 345 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 CNTD2Q9H8S5 307 aa22.59■■□□□ 1.21
CPNE1-216ENST00000437340 A0A0A6YYJ9 748 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 BPNT1O95861 308 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 CSF1P09603 554 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 PSMB1P20618 241 aaKnown RBP22.58■■□□□ 1.21
CPNE1-216ENST00000437340 SOX8P57073 446 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 OR13C9Q8NGT0 318 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 SPTSSAQ969W0 71 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 FBXO17Q96EF6 278 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 ZNF845Q96IR2 970 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-216ENST00000437340 ING3Q9NXR8 418 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 RAB22AQ9UL26 194 aa22.58■■□□□ 1.21
CPNE1-216ENST00000437340 NCOA6Q14686 2063 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-216ENST00000437340 KLRC4-KLRK1H3BQV0 150 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 GMDSO60547 372 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 FAUP35544 74 aaKnown RBP22.58■■□□□ 1.2
CPNE1-216ENST00000437340 NKX2-5P52952 324 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-216ENST00000437340 RRADP55042 308 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 CLDN18P56856 261 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 TMEM251Q8N6I4 163 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 OR14K1Q8NGZ2 314 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 ZNF486Q96H40 463 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-216ENST00000437340 PAQR5Q9NXK6 330 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-216ENST00000437340 PLEK2Q9NYT0 353 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 FBLN5Q9UBX5 448 aa22.58■■□□□ 1.2
CPNE1-216ENST00000437340 ZNF708P17019 499 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 RFC3P40938 356 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 MAGEA5P43359 124 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 CD83Q01151 205 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 PLGLB1Q02325 96 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 ECH1Q13011 328 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 RAB35Q15286 201 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 BCL2A1Q16548 175 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 RSPO1Q2MKA7 263 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-216ENST00000437340 MEIOBQ8N635 442 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 FAM71F1Q96KD3 344 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-216ENST00000437340 FYTTD1Q96QD9 318 aaKnown RBP22.57■■□□□ 1.2
CPNE1-216ENST00000437340 SCPEP1Q9HB40 452 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 MCUBQ9NWR8 336 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 EMC3Q9P0I2 261 aa22.57■■□□□ 1.2
CPNE1-216ENST00000437340 METTL21EPA6NDL7 271 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 F5H5K5 113 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 CELA3AP09093 270 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 LIPCP11150 499 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 ABOP16442 354 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 SCRN3Q0VDG4 424 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 GSG1Q2KHT4 349 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 RAB12Q6IQ22 244 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 Q6ZSR3 168 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 ABHD3Q8WU67 409 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 DMRTB1Q96MA1 342 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 C20orf85Q9H1P6 137 aa22.56■■□□□ 1.2
CPNE1-216ENST00000437340 FAM166BA8MTA8 275 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 M0R135 149 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 CD46P15529 392 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 ZNF93P35789 620 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-216ENST00000437340 MEOX1P50221 254 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 RTP5Q14D33 572 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 TMEM255AQ5JRV8 349 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SFRP4Q6FHJ7 346 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-216ENST00000437340 GALNTL5Q7Z4T8 443 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 GPX8Q8TED1 209 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 ZNF799Q96GE5 643 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SOX7Q9BT81 388 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 TRAF4Q9BUZ4 470 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SGCEO43556 437 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SCGNO76038 276 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 ALDOBP05062 364 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SLC6A9P48067 706 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 PCGF3Q3KNV8 242 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 VASH2Q86V25 355 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 OR5AS1Q8N127 324 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 ALKBH3Q96Q83 286 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-216ENST00000437340 FOXB1Q99853 325 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 MED28Q9H204 178 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 SLCO5A1Q9H2Y9 848 aa22.55■■□□□ 1.2
CPNE1-216ENST00000437340 PRAF2O60831 178 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 PEX14O75381 377 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 CRYGSP22914 178 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 ANOS1P23352 680 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 ACTBP60709 375 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 ACTG1P63261 375 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 QRFPP83859 136 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 PMPCAQ10713 525 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 NRN1LQ496H8 165 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 NOXA1Q86UR1 476 aa22.54■■□□□ 1.2
CPNE1-216ENST00000437340 C10orf35Q96D05 121 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms