RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OPALINQ96PE5 141 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 LZTS2Q9BRK4 669 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 UCK2Q9BZX2 261 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 ACTR3CQ9C0K3 210 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CDC42EP4Q9H3Q1 356 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 MFSD1Q9H3U5 465 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPP21Q9H633 154 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 TUBG2Q9NRH3 451 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 AHSPQ9NZD4 102 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 PCYOX1Q9UHG3 505 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 MRPS18BQ9Y676 258 aaKnown RBP2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 C5orf42Q9H799 3197 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 CFAP54Q96N23 3096 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUOX1Q9NRD9 1551 aa2.02□□□□□ -2.09
HMGB1P27-201ENST00000431429 USP34Q70CQ2 3546 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 MROH7-TTC4A0A0A0MT08 1334 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 MN1Q10571 1320 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 PRSS37A4D1T9 235 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 A6NDN8 102 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NCBP2LA6PVI3 153 aaKnown RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF99A8MXY4 864 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 SUPT3HB4E1H0 165 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRIM49D1C9J1S8 452 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TEX46H3BTG2 121 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 LAD1O00515 517 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NUPL2O15504 423 aaKnown RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 AIREO43918 545 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC25A27O95847 323 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 HLA-HP01893 362 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 UBTFL6P0CB48 400 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 RALBP11234 206 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 PSG2P11465 335 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ADRB3P13945 408 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 CNR1P21554 472 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR1G1P47890 313 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC11A1P49279 550 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 RND2P52198 227 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 STXBP1P61764 594 aaKnown RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TWF1Q12792 350 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NCF4Q15080 339 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZBED5Q49AG3 693 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 PIGGQ5H8A4 983 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 BEX5Q5H9J7 111 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 CYB5R2Q6BCY4 276 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TWF2Q6IBS0 349 aaKnown RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR52W1Q6IF63 320 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TTC23LQ6PF05 361 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NPSR1Q6W5P4 371 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 FBXW12Q6X9E4 464 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 FAM122BQ7Z309 247 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 KRTAP11-1Q8IUC1 163 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 C12orf56Q8IXR9 622 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 MICU2Q8IYU8 434 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 RNF175Q8N4F7 328 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NPWQ8N729 165 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 Q8N7P7 452 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 TTC29Q8NA56 475 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 BBOF1Q8ND07 529 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR10G4Q8NGN3 311 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 FAM104AQ969W3 186 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 MRGPRFQ96AM1 343 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 CREB3L1Q96BA8 519 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 FAM3DQ96BQ1 224 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 DNAJC19Q96DA6 116 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 GALNT14Q96FL9 552 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 GSDMAQ96QA5 445 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 BCL7BQ9BQE9 202 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZYG11BQ9C0D3 744 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 PORCNQ9H237 461 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ASB8Q9H765 288 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 RETNQ9HD89 108 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 CLN6Q9NWW5 311 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF629Q9UEG4 869 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 NEU3Q9UQ49 428 aa2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 RCL1Q9Y2P8 373 aaKnown RBP2.01□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZFHX4Q86UP3 3567 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 MROH5Q6ZUA9 1318 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 EPG5Q9HCE0 2579 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGLV2-33A0A075B6J2 118 aaPredicted RBP2□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRBV6-6A0A0A6YYG2 114 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGHV3-66A0A0C4DH42 116 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 A6NDX4 124 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 GABRR3A8MPY1 467 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 LOC730098B7Z3J9 87 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 ERI3O43414 337 aaKnown RBP2□□□□□ -2.09
HMGB1P27-201ENST00000431429 FKBP6O75344 327 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 FCN3O75636 299 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB3DO95716 219 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 PNMA6AP0CW24 399 aaPredicted RBP2□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR5H8P0DN80 308 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 MGMTP16455 207 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 MAS1LP35410 378 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCL23P55773 120 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 DAOAP59103 153 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 EIF3EP60228 445 aaKnown RBP2□□□□□ -2.09
HMGB1P27-201ENST00000431429 SEMG2Q02383 582 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAD51Q06609 339 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 SMARCB1Q12824 385 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 PON2Q15165 354 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms