RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CDV3Q9UKY7 258 aaKnown RBP14.63□□□□□ -0.07
USHBP1-203ENST00000431146 CACNG2Q9Y698 323 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TNRC6AQ8NDV7 1962 aaKnown RBP14.63□□□□□ -0.07
USHBP1-203ENST00000431146 MEIOCA2RUB1 952 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 MRPL33O75394 65 aaKnown RBP14.63□□□□□ -0.07
USHBP1-203ENST00000431146 KRT33AO76009 404 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 KDM4BO94953 1096 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TAS2R20P59543 309 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 SFRP5Q5T4F7 317 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 OR10K2Q6IF99 312 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 ZNF774Q6NX45 483 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 RNF144BQ7Z419 303 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 LURAP1LQ8IV03 231 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 SIAH3Q8IW03 269 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 TMEM178AQ8NBL3 297 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 OR4D6Q8NGJ1 314 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 FGFBP3Q8TAT2 258 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 KLK11Q9UBX7 282 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 MYO7BQ6PIF6 2116 aa14.63□□□□□ -0.07
USHBP1-203ENST00000431146 ARPC4-TTLL3A0A0A6YYG9 625 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 LOC100289279A0A1B0GTE1 492 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 TTLL8A6PVC2 850 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZNHIT1O43257 154 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZNF20P17024 532 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 CFPP27918 469 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 BTCP35070 178 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 GDNFP39905 211 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 RAB25P57735 213 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 AGAP6Q5VW22 663 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZNF813Q6ZN06 617 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 OR1M1Q8NGA1 313 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 AKR7LQ8NHP1 331 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZC3HAV1LQ96H79 300 aaKnown RBP14.62□□□□□ -0.07
USHBP1-203ENST00000431146 LYZL4Q96KX0 146 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 SLC7A10Q9NS82 523 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 SPRR3Q9UBC9 169 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 MCTS1Q9ULC4 181 aaKnown RBP14.62□□□□□ -0.07
USHBP1-203ENST00000431146 IGKV3D-15A0A087WSY6 115 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 M0R135 149 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ACOT7O00154 380 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 CDK2AP1O14519 115 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 RGS13O14921 159 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 CTDSPLO15194 276 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 SGCEO43556 437 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ORC5O43913 435 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 CTAG2O75638 210 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ARSBP15848 533 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZNF32P17041 273 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 BDKRB2P30411 391 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 SLC22A24Q8N4F4 322 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 DUSP18Q8NEJ0 188 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ZNF799Q96GE5 643 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 SLCO5A1Q9H2Y9 848 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 ACKR4Q9NPB9 350 aa14.62□□□□□ -0.07
USHBP1-203ENST00000431146 TRGV5A0A0B4J1U4 118 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 GSTZ1O43708 216 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-203ENST00000431146 WISP2O76076 250 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 MT-ND4P03905 459 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 CTSSP25774 331 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 RFPL4BQ6ZWI9 263 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 AKAP14Q86UN6 197 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 OR5D14Q8NGL3 314 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 ANGPTL6Q8NI99 470 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 TMEM45BQ96B21 275 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 CNTD2Q9H8S5 307 aa14.61□□□□□ -0.07
USHBP1-203ENST00000431146 MEGF11A6BM72 1044 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 CST2P09228 141 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 M6PRP20645 277 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SLC6A1P30531 599 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 FOXG1P55316 489 aaPredicted RBP14.6□□□□□ -0.07
USHBP1-203ENST00000431146 HGFACQ04756 655 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 KCNJ8Q15842 424 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SNAI3Q3KNW1 292 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 RIPPLY2Q5TAB7 128 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 ANKRD16Q6P6B7 361 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SLC51BQ86UW2 128 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 LYPD6Q86Y78 171 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SKA3Q8IX90 412 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 OR6M1Q8NGM8 313 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 UBASH3BQ8TF42 649 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 ATG5Q9H1Y0 275 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 RHBDD3Q9Y3P4 386 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 ARHGAP21Q5T5U3 1957 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SYNGR3O43761 229 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 CRYZL1O95825 349 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 RAB3AP20336 220 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 OTX1P32242 354 aaPredicted RBP14.6□□□□□ -0.07
USHBP1-203ENST00000431146 PRSS12P56730 875 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SCAND1P57086 179 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 CHMP1BQ7LBR1 199 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 SLC16A14Q7RTX9 510 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 NKAIN3Q8N8D7 197 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 PLEKHA1Q9HB21 404 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 TMEM138Q9NPI0 162 aa14.6□□□□□ -0.07
USHBP1-203ENST00000431146 PAQR5Q9NXK6 330 aaPredicted RBP14.6□□□□□ -0.07
USHBP1-203ENST00000431146 LOC390937A0A1W2PQ73 354 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 GGT3PA6NGU5 568 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 GABARAPH6UMI1 98 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 XRCC3O43542 346 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms