RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 GYPBP06028 91 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 PPIAL4GP0DN37 164 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 CLUP10909 449 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 CA6P23280 308 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 PRTN3P24158 256 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 GNB2P62879 340 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 PCK2Q16822 640 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 PGAP1Q75T13 922 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 FITM2Q8N6M3 262 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 CELF2-AS1Q8N7Q2 184 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 RAB40AQ8WXH6 277 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 TRIM15Q9C019 465 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 UFSP2Q9NUQ7 469 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 TRAV40A0A0B4J280 105 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 CD300LBA8K4G0 201 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 TNFRSF11BO00300 401 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 PSMB10P40306 273 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 PITPNBP48739 271 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 TPTEP56180 551 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 GNGT1P63211 74 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 CRMP1Q14194 572 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 WDR25Q64LD2 544 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-206ENST00000430705 C16orf89Q6UX73 402 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 DCDC5Q6ZRR9 648 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 RASSF6Q6ZTQ3 369 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 MRPL21Q7Z2W9 205 aaKnown RBP13.55□□□□□ -0.24
PTPRA-206ENST00000430705 DCXRQ7Z4W1 244 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 LNX2Q8N448 690 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 OR8B3Q8NGG8 313 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 OR52L1Q8NGH7 329 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 ADAT1Q9BUB4 502 aaKnown RBP13.55□□□□□ -0.24
PTPRA-206ENST00000430705 ARMC1Q9NVT9 282 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 ACTR3BQ9P1U1 418 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 PCDHGB1Q9Y5G3 927 aa13.55□□□□□ -0.24
PTPRA-206ENST00000430705 KIR2DS1A0A191URI9 304 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 LRRC30A6NM36 301 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 TNFRSF13BO14836 293 aaPredicted RBP13.54□□□□□ -0.24
PTPRA-206ENST00000430705 KRT36O76013 467 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 SOX14O95416 240 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
PTPRA-206ENST00000430705 SLC2A1P11166 492 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF823P16415 610 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 CPT2P23786 658 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 MALLQ13021 153 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 BAMBIQ13145 260 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 SLC9A3R2Q15599 337 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 SPATS1Q496A3 300 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 LRRN1Q6UXK5 716 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 AQP11Q8NBQ7 271 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 ZMYND19Q96E35 227 aaPredicted RBP13.54□□□□□ -0.24
PTPRA-206ENST00000430705 TBC1D23Q9NUY8 699 aa13.54□□□□□ -0.24
PTPRA-206ENST00000430705 SPRY1O43609 319 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-206ENST00000430705 CCNB2O95067 398 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SPARCP09486 303 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SPI1P17947 270 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 MS4A2Q01362 244 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 OR8G1Q15617 311 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 DRAM2Q6UX65 266 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 WDR86Q86TI4 376 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SPRYD4Q8WW59 207 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 ERGIC1Q969X5 290 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SLAMF6Q96DU3 332 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 NUDT16L1Q9BRJ7 211 aaKnown RBP13.53□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF747Q9BV97 191 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 TSSK6Q9BXA6 273 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 SMURF1Q9HCE7 757 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 CLN8Q9UBY8 286 aa13.53□□□□□ -0.24
PTPRA-206ENST00000430705 CLDN34H7C241 214 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 PHYHO14832 338 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 DCTN3O75935 186 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 ENTPD1P49961 510 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 PRKXP51817 358 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 SLC25A1P53007 311 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 FGF12P61328 243 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 BTNL3Q6UXE8 466 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
PTPRA-206ENST00000430705 BRD3OSQ6XYD6 125 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 ZNF826PQ6ZT77 177 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 SPSB4Q96A44 273 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 AMELYQ99218 206 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 COPS4Q9BT78 406 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 DGCR6LQ9BY27 220 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 MS4A7Q9GZW8 240 aaPredicted RBP13.52□□□□□ -0.25
PTPRA-206ENST00000430705 MAGIXQ9H6Y5 334 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 ZMAT3Q9HA38 289 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms