RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 SF3B5Q9BWJ5 86 aaKnown RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 MRPS18AQ9NVS2 196 aaKnown RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 TRAV17A0A0B4J275 112 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CCR6P51684 374 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 RAB11AP62491 216 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ZXDAP98168 799 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF266Q14584 549 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF766Q5HY98 468 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 TMEM81Q6P7N7 255 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 MKRN2OSH3BPM6 223 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 OR14J1Q9UGF5 321 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF136P52737 540 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 PCK2Q16822 640 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 C9orf135Q5VTT2 229 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 TMEM229BQ8NBD8 167 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 FBLIM1Q8WUP2 373 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ASF1BQ9NVP2 202 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 MSTNO14793 375 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 BET1O15155 118 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 GSK3AP49840 483 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 RAC3P60763 192 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 LSM6P62312 80 aaKnown RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CEBPEQ15744 281 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 AADACL4Q5VUY2 407 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CMTM4Q8IZR5 234 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 OR51F2Q8NH61 342 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 SGK3Q96BR1 496 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 PELI1Q96FA3 418 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 MED29Q9NX70 200 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 NUDT19A8MXV4 375 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 DHRS3O75911 302 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 IL2RAP01589 272 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 GABRA2P47869 451 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CLDN15P56746 228 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
PTCH1-208ENST00000430669 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 P4HTMQ9NXG6 502 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 PRELID3BQ9Y3B1 194 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 GGTLC2Q14390 218 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 DRAM2Q6UX65 266 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 DUSP1P28562 367 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 S100A11P31949 105 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ARL3P36405 182 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 AKR1D1P51857 326 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 OR51S1Q8NGJ8 323 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 SLC7A6Q92536 515 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF92Q03936 586 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ACER2Q5QJU3 275 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
PTCH1-208ENST00000430669 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 KCNIP2Q9NS61 270 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 LAMP3Q9UQV4 416 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 A0A0A6YYJ9 748 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 FITM1A5D6W6 292 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 AQP7P3A6NL99 342 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 HBE1P02100 147 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CNR1P21554 472 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 C11orf91Q3C1V1 193 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 MTFR2Q6P444 385 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 SLC16A12Q6ZSM3 486 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-208ENST00000430669 HIPK2Q9H2X6 1198 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 KRBOX1C9JBD0 128 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TAAR5O14804 337 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 AADACL3Q5VUY0 350 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TCTE3Q8IZS6 198 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF845Q96IR2 970 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-208ENST00000430669 DERL3Q96Q80 235 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 ICAM5Q9UMF0 924 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TRGV5A0A0B4J1U4 118 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 MT-CO3P00414 261 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CT45A8P0DMV1 189 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CT45A9P0DMV2 189 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CT45A2Q5DJT8 189 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 YLPM1P49750 1951 aaKnown RBP10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TO15178 435 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CTDSPLO15194 276 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 DHHO43323 396 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 PMS2CLQ68D20 193 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 CHST6Q9GZX3 395 aa10.36□□□□□ -0.75
PTCH1-208ENST00000430669 EXO1Q9UQ84 846 aaKnown RBP10.36□□□□□ -0.75
PTCH1-208ENST00000430669 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 EPHA1P21709 976 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 EIF2S3LQ2VIR3 472 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 OR5D18Q8NGL1 313 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 MCHR2Q969V1 340 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 OR5B12Q96R08 314 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 SIGLEC11Q96RL6 698 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 CDC42EP2O14613 210 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 OR2F2O95006 317 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ACTL6AO96019 429 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 CD1AP06126 327 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms