RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 NUDCD3Q8IVD9 361 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 METTL4Q8N3J2 472 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 SAMD12Q8N8I0 201 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 DCAF4L2Q8NA75 395 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 OR4M2Q8NGB6 313 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 OR52B6Q8NGF0 335 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 OR1B1Q8NGR6 318 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 OR6X1Q8NH79 312 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 OR10G6Q8NH81 332 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 NANPQ8TBE9 248 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 NT5C3BQ969T7 300 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF501Q96CX3 271 aaPredicted RBP3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CMTM5Q96DZ9 223 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CNRIP1Q96F85 164 aaPredicted RBP3.35□□□□□ -1.87
HMGB3-203ENST00000430118 MS4A14Q96JA4 679 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 RILPQ96NA2 401 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 DUX3Q96PT4 197 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CCDC32Q9BV29 185 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 DGCR6LQ9BY27 220 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 ULBP3Q9BZM4 244 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 PKIBQ9C010 78 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 DNTTIP1Q9H147 329 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 METTL9Q9H1A3 318 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 MOB1AQ9H8S9 216 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 FN3KRPQ9HA64 309 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 WDR41Q9HAD4 459 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 AGPAT3Q9NRZ7 376 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 MCUBQ9NWR8 336 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 TREM2Q9NZC2 230 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 TMEM181Q9P2C4 612 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CTSFQ9UBX1 484 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CRLS1Q9UJA2 301 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 NPIPA1Q9UND3 350 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 BAIAP2Q9UQB8 552 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 HS3ST2Q9Y278 367 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 EXOGQ9Y2C4 368 aaKnown RBP3.35□□□□□ -1.87
HMGB3-203ENST00000430118 NAALAD2Q9Y3Q0 740 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 PDZD2O15018 2839 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 CACNA1DQ01668 2161 aa3.35□□□□□ -1.87
HMGB3-203ENST00000430118 SCN8AQ9UQD0 1980 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 FER1L5A0AVI2 2057 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 POLQO75417 2590 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 IGHV4-30-2A0A087WSY4 118 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 C9orf170A2RU37 121 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 OR6C70A6NIJ9 312 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 METTL15A6NJ78 407 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 KCNK1O00180 336 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 SULT1C2O00338 296 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 COPEO14579 308 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 ITGB1BP1O14713 200 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 TOX3O15405 576 aaPredicted RBP3.34□□□□□ -1.87
HMGB3-203ENST00000430118 LRRTM2O43300 516 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 TYROBPO43914 113 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 B4GALT2O60909 372 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 SNAPC5O75971 98 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 RAB3DO95716 219 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 TTC4O95801 387 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CALCAP01258 141 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 RHOCP08134 193 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 FCGR3AP08637 254 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 GNAO1P09471 354 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 LINC00614P0C842 121 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 ANXA3P12429 323 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CD1DP15813 335 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PGCP20142 388 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 HNF1AP20823 631 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 IGFBP5P24593 272 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 LAP3P28838 519 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CRABP1P29762 137 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PPP2R1BP30154 601 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 GPX4P36969 197 aaPredicted RBP3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CEACAM6P40199 344 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 ID1P41134 155 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 ETV6P41212 452 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CARD18P57730 90 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 OR2B6P58173 313 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 DAOAP59103 153 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 GABARAPL2P60520 117 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 RPS15P62841 145 aaKnown RBP3.34□□□□□ -1.87
HMGB3-203ENST00000430118 SKP1P63208 163 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF85Q03923 595 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PRKCDQ05655 676 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PUDPQ08623 228 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 FGL1Q08830 312 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PJVKQ0ZLH3 352 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 IL17AQ16552 155 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 SYPL1Q16563 259 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PPP1R3AQ16821 1122 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 MICAQ29983 383 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 GOLGA7BQ2TAP0 167 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 MS4A18Q3C1V0 323 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 HSP90AA4PQ58FG1 418 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PABPC1L2AQ5JQF8 200 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 CDKL4Q5MAI5 379 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 SEL1L2Q5TEA6 688 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 GPR107Q5VW38 600 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 PNCKQ6P2M8 343 aa3.34□□□□□ -1.87
HMGB3-203ENST00000430118 C22orf39Q6P5X5 142 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms