RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 TWSG1Q9GZX9 223 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 TM7SF3Q9NS93 570 aa13.02□□□□□ -0.32
SYNGAP1-203ENST00000428982 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 MYOFQ9NZM1 2061 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 TRAV14DV4A0A0A6YYC5 116 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 PRSS38A1L453 326 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 H3BSH0 61 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 TAAR5O14804 337 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 KCNAB3O43448 404 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 MAKP20794 623 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 THBS2P35442 1172 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF41P51814 821 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 C1orf61Q13536 156 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 MFSD9Q8NBP5 474 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 DNAJA3Q96EY1 480 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 SIT1Q9Y3P8 196 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 TIMM10BQ9Y5J6 103 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM238LA0A1B0GVL6 79 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 ELOA3DA6NLF2 546 aaPredicted RBP13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 SMPD2O60906 423 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 SERPINA2P20848 420 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 ELOA3BQ3SY89 546 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 CDRT4Q8N9R6 151 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 ELOA3Q8NG57 546 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 GPR119Q8TDV5 335 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 SERINC2Q96SA4 455 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 PLA2G12AQ9BZM1 189 aa13.02□□□□□ -0.33
SYNGAP1-203ENST00000428982 K7ESM1 405 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BKO60814 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BJP06899 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 RAB7AP51149 207 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 METAP1P53582 386 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 AGBL4Q5VU57 503 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 SLC16A9Q7RTY1 509 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 IKZF2Q9UKS7 526 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 FOXJ3Q9UPW0 622 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 XKRYO14609 159 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 FRS3O43559 492 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 APLNRP35414 380 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 GRK6P43250 576 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 PNLIPRP3Q17RR3 467 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 NPSR1Q6W5P4 371 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 HAS2Q92819 552 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 SIRT3Q9NTG7 399 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 NRG2O14511 850 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 NXPH2O95156 264 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 PAPLNO95428 1278 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 CD14P08571 375 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 FCARP24071 287 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 ABHD17CQ6PCB6 329 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 SIRT6Q8N6T7 355 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF676Q8N7Q3 588 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 WFIKKN1Q96NZ8 548 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 FAAP24Q9BTP7 215 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 G6PC3Q9BUM1 346 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 S1PR5Q9H228 398 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 ETV7Q9Y603 341 aa13.01□□□□□ -0.33
SYNGAP1-203ENST00000428982 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF727A8MUV8 499 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 H7C417 338 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 Q7L0L9 218 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 LMNTD1Q8N9Z9 388 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 LFNGQ8NES3 379 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-203ENST00000428982 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 ALKBH7Q9BT30 221 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-203ENST00000428982 SIDT1Q9NXL6 827 aaKnown RBP13□□□□□ -0.33
SYNGAP1-203ENST00000428982 MTFP1Q9UDX5 166 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 DNAH12Q6ZR08 3092 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 IDSB3KWA1 339 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 GALNTL5Q7Z4T8 443 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 C16orf58Q96GQ5 468 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 NKX3-1Q99801 234 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-203ENST00000428982 A0A0A6YYD5 115 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 PLPP2O43688 288 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 JTBO76095 146 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 CHRNB4P30926 498 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 PSMB10P40306 273 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 LPAR6P43657 344 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 HAGHQ16775 308 aa13□□□□□ -0.33
SYNGAP1-203ENST00000428982 RPL22L1Q6P5R6 122 aaKnown RBP13□□□□□ -0.33
SYNGAP1-203ENST00000428982 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms