RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 OR3A4PP47883 348 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 FOXG1P55316 489 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 RAG2P55895 527 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF121P58317 390 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 RASGEF1BQ0VAM2 473 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 KLF9Q13886 244 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 OPCMLQ14982 345 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 RAB11BQ15907 218 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PLPPR5Q32ZL2 321 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 CDNFQ49AH0 187 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ELP2Q6IA86 826 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 C5orf46Q6UWT4 87 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ANGPTL5Q86XS5 388 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 MISPQ8IVT2 679 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TNFAIP8L1Q8WVP5 186 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ASB10Q8WXI3 467 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TMEM234Q8WY98 164 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 THRSPQ92748 146 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 MCHR2Q969V1 340 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 SPACA9Q96E40 222 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF416Q9BWM5 594 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF292O60281 2723 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 OR2M5A3KFT3 312 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TOX3O15405 576 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 OR2T1O43869 369 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 CXCL13O43927 109 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 KLF7O75840 302 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 TPOP07202 933 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 JMJD7P0C870 316 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF35P13682 527 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 HTR2CP28335 458 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 NKAPLQ5M9Q1 402 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TMEM81Q6P7N7 255 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 RPS19BP1Q86WX3 136 aaKnown RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 ABHD3Q8WU67 409 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 C15orf40Q8WUR7 153 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ASB17Q8WXJ9 295 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 DDIT4LQ96D03 193 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 OR2M2Q96R28 347 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 GPHA2Q96T91 129 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ST6GALNAC5Q9BVH7 336 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ACTR6Q9GZN1 396 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PLEKHA1Q9HB21 404 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PARPBPQ9NWS1 579 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PLEKHA6Q9Y2H5 1048 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ETV7Q9Y603 341 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ARPC4-TTLL3A0A0A6YYG9 625 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 RPS10-NUDT3A0A1W2PQS6 291 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 G3V3Q6 166 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 GABARAPH6UMI1 98 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PEX14O75381 377 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ZNF254O75437 659 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 PSMB1P20618 241 aaKnown RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 SERPINA2P20848 420 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ACHEP22303 614 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 AP3S2P59780 193 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 DEFA5Q01523 94 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 Q0VFX4 171 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PMPCAQ10713 525 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 AWAT2Q6E213 333 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 KCTD18Q6PI47 426 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 KLHL24Q6TFL4 600 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ATRAIDQ6UW56 229 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 BTN2A1Q7KYR7 527 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 MYPOPQ86VE0 399 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 AGBL5Q8NDL9 886 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 OR1J2Q8NGS2 313 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 OR2AJ1Q8NGZ0 328 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 GPR137Q96N19 417 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 HDHD3Q9BSH5 251 aaPredicted RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 B3GNT2Q9NY97 397 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 LUZP4Q9P127 313 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 IL17BQ9UHF5 180 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 LHFPL6Q9Y693 200 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TMEM265A0A087WTH1 108 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 A0A0J9YW62 118 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 C13orf42A0A1B0GVH6 325 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 SOCS1O15524 211 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 SPRY1O43609 319 aaPredicted RBP7.4□□□□□ -1.22
CD44-208ENST00000428726 TSPAN9O75954 239 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 TTRP02766 147 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 CD2P06729 351 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 LPLP06858 475 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 AVPR2P30518 371 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 SCAND1P57086 179 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 MRPS10P82664 201 aaKnown RBP7.4□□□□□ -1.22
CD44-208ENST00000428726 SORDQ00796 357 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 PCOLCEQ15113 449 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 CD276Q5ZPR3 534 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 RABEPKQ7Z6M1 372 aa7.4□□□□□ -1.22
CD44-208ENST00000428726 HGDQ93099 445 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms