RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 HIVEP3Q5T1R4 2406 aa6.84□□□□□ -1.32
HMGA1P4-201ENST00000428643 FLNCQ14315 2725 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 A0A0U1RQV5 110 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 DPRXA6NFQ7 191 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 J3QW42 95 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OGG1O15527 345 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 XRCC2O43543 280 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 SYT7O43581 403 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ATE1O95260 518 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 NGFP01138 241 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 TTRP02766 147 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 TFAP2AP05549 437 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 EPXP11678 715 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF35P13682 527 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 CD36P16671 472 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 IGFBP2P18065 325 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ACHEP22303 614 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ANOS1P23352 680 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 CFL1P23528 166 aaKnown RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 PCSK6P29122 969 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 GABRA5P31644 462 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 LIPAP38571 399 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ALDH3B2P48448 385 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ERVS71-1P61550 626 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RPS23P62266 143 aaKnown RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RPS25P62851 125 aaKnown RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 TPBGQ13641 420 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 BLMHQ13867 455 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 COLCA1Q6ZS62 124 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 SATL1Q86VE3 508 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 PHC2Q8IXK0 858 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 DMRTC2Q8IXT2 367 aaPredicted RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RDH10Q8IZV5 341 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR5L1Q8NGL2 311 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR1J1Q8NGS3 322 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR13F1Q8NGS4 319 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR13C3Q8NGS6 347 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR13C5Q8NGS8 318 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR51E1Q8TCB6 317 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RPS4Y2Q8TD47 263 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RGP1Q92546 391 aaPredicted RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 PIK3IP1Q96FE7 263 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 REEP6Q96HR9 211 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RGCCQ9H4X1 137 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 PLEKHA1Q9HB21 404 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 TBCCD1Q9NVR7 557 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF319Q9P2F9 582 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF281Q9Y2X9 895 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 RNF115Q9Y4L5 304 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 ATP23Q9Y6H3 246 aa6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 NCOA6Q14686 2063 aaPredicted RBP6.83□□□□□ -1.32
HMGA1P4-201ENST00000428643 FREM1Q5H8C1 2179 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 USP9XQ93008 2570 aaPredicted RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 LRRK2Q5S007 2527 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 ANKHD1Q8IWZ3 2542 aaKnown RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 LOC100506127A0A0U1RQW1 187 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 CLEC18AA5D8T8 446 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 GGT3PA6NGU5 568 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 DEFB108AA8MXU0 73 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 PLPP2O43688 288 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 ICMTO60725 284 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 NOL3O60936 208 aaKnown RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 RGS9O75916 674 aaPredicted RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 OCM2P0CE71 109 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF20P17024 532 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 NR4A1P22736 598 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 PSMA1P25786 263 aaKnown RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 TGFBR2P37173 567 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 RAD52P43351 418 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 SOX2P48431 317 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 UCP2P55851 309 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 PRSS12P56730 875 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 GPR50Q13585 617 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 GK2Q14410 553 aaPredicted RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 HLXQ14774 488 aaPredicted RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 YIF1BQ5BJH7 314 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 NCMAPQ5T1S8 102 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 TMEM244Q5VVB8 128 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 CLEC18BQ6UXF7 455 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 PGAP1Q75T13 922 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 DOK3Q7L591 496 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 CLEC18CQ8NCF0 446 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 KBTBD8Q8NFY9 601 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR10AC1Q8NH08 325 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 SLC25A40Q8TBP6 338 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 GPR148Q8TDV2 347 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 TMIGD2Q96BF3 282 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 PGLYRP3Q96LB9 341 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 BCL2L14Q9BZR8 327 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR2J1Q9GZK6 312 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 POFUT1Q9H488 388 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 EXOSC4Q9NPD3 245 aaKnown RBP6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF391Q9UJN7 358 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 HHLA2Q9UM44 414 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 DHDHQ9UQ10 334 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 STARD10Q9Y365 291 aa6.82□□□□□ -1.32
HMGA1P4-201ENST00000428643 MYO7BQ6PIF6 2116 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms