RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 PYCR1P32322 319 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 MSX2P35548 267 aaPredicted RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 RPS27P42677 84 aaKnown RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 IL13RA1P78552 427 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 SPIBQ01892 262 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 ECH1Q13011 328 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF362Q5T0B9 420 aaPredicted RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 C16orf87Q6PH81 154 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF620Q6ZNG0 422 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 DCDC5Q6ZRR9 648 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 C1orf87Q8N0U7 546 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 UFSP2Q9NUQ7 469 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 ADA2Q9NZK5 511 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 CLN8Q9UBY8 286 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 CD300LBA8K4G0 201 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 M0R135 149 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 PHYHO14832 338 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 IDH3BO43837 385 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 OR10H3O60404 316 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SFTPBP07988 381 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 HSD17B1P14061 328 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 CA6P23280 308 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 PRDX6P30041 224 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 RRM2P31350 389 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 OTX1P32242 354 aaPredicted RBP8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SMIM11AP58511 58 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF92Q03936 586 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SLC36A3Q495N2 470 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 GLYATL3Q5SZD4 288 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 RUSC1-AS1Q66K80 236 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SFRP4Q6FHJ7 346 aaPredicted RBP8.34□□□□□ -1.07
GACAT3-201ENST00000426539 PGBD2Q6P3X8 592 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 PGAP1Q75T13 922 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 NLRC3Q7RTR2 1065 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 OR2AJ1Q8NGZ0 328 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 OR2AE1Q8NHA4 323 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 GNPDA2Q8TDQ7 276 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 ERGIC1Q969X5 290 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 TMIGD2Q96BF3 282 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 CMTM5Q96DZ9 223 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF799Q96GE5 643 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 TBX15Q96SF7 602 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 ELAC2Q9BQ52 826 aaKnown RBP8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SLITRK2Q9H156 845 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 EGLN3Q9H6Z9 239 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 SMURF1Q9HCE7 757 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 CD300AQ9UGN4 299 aa8.34□□□□□ -1.07
GACAT3-201ENST00000426539 TVP23AA6NH52 213 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 SRRM5B3KS81 715 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 LGALS8O00214 317 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 BHLHE40O14503 412 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 ARPC2O15144 300 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 ENSAO43768 121 aaKnown RBP8.33□□□□□ -1.08
GACAT3-201ENST00000426539 HLA-DQA2P01906 255 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 IRF2P14316 349 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 MMP9P14780 707 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 NOS3P29474 1203 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 CFHR2P36980 270 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 TPTEP56180 551 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 TSPAN31Q12999 210 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 MALLQ13021 153 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 OR8G1Q15617 311 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 Q6YL49 198 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 MRPL21Q7Z2W9 205 aaKnown RBP8.33□□□□□ -1.08
GACAT3-201ENST00000426539 CYB561A3Q8NBI2 242 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 OR51L1Q8NGJ5 315 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 OR8D4Q8NGM9 314 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 OR11L1Q8NGX0 322 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 SPRYD4Q8WW59 207 aaPredicted RBP8.33□□□□□ -1.08
GACAT3-201ENST00000426539 ADAT1Q9BUB4 502 aaKnown RBP8.33□□□□□ -1.08
GACAT3-201ENST00000426539 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 IL1RAPQ9NPH3 570 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 TNFRSF19Q9NS68 423 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 RNF7Q9UBF6 113 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 MAGEL2Q9UJ55 1249 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 KCNG2Q9UJ96 466 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 MMP24Q9Y5R2 645 aa8.33□□□□□ -1.08
GACAT3-201ENST00000426539 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 CENPVL3A0A0U1RRI6 287 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 FAM181BA6NEQ2 426 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF879B4DU55 563 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 FABP3P05413 133 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 SLC2A1P11166 492 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 HMGA2P52926 109 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 ELF3P78545 371 aaPredicted RBP8.32□□□□□ -1.08
GACAT3-201ENST00000426539 PCK2Q16822 640 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 GPR157Q5UAW9 335 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF770Q6IQ21 691 aaPredicted RBP8.32□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF826PQ6ZT77 177 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 GCSAMQ8N6F7 178 aa8.32□□□□□ -1.08
GACAT3-201ENST00000426539 BOLLQ8N9W6 283 aaKnown RBP8.32□□□□□ -1.08
GACAT3-201ENST00000426539 SLC37A3Q8NCC5 494 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms