RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NAT2P11245 290 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 MYF6P23409 242 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 ART1P52961 327 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 PRSS12P56730 875 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 OR2T2Q6IF00 324 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 PGAP1Q75T13 922 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 YIPF7Q8N8F6 280 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 GTF3AQ92664 365 aaKnown RBP20.91■□□□□ 0.94
VEGFA-209ENST00000425836 SORCS2Q96PQ0 1159 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 RHNO1Q9BSD3 238 aa20.91■□□□□ 0.94
VEGFA-209ENST00000425836 REPIN1Q9BWE0 567 aaKnown RBP20.91■□□□□ 0.94
VEGFA-209ENST00000425836 FGF20Q9NP95 211 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-209ENST00000425836 ACOD1A6NK06 481 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 XRCC2O43543 280 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 SRSF10O75494 262 aaKnown RBP20.9■□□□□ 0.94
VEGFA-209ENST00000425836 PNPP00491 289 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 IGHV4-39P01824 125 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 MMP16P51512 607 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 ZNF829Q3KNS6 432 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-209ENST00000425836 LHFPL3Q86UP9 236 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 GGHQ92820 318 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 SPSB4Q96A44 273 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 ZNF649Q9BS31 505 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 OR10A2Q9H208 303 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 CXXC4Q9H2H0 198 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 RAB26Q9ULW5 256 aa20.9■□□□□ 0.94
VEGFA-209ENST00000425836 XPNPEP2O43895 674 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 MFGE8Q08431 387 aaPredicted RBP20.89■□□□□ 0.94
VEGFA-209ENST00000425836 GALEQ14376 348 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 SNCBQ16143 134 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 CDONQ4KMG0 1287 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 TP53I3Q53FA7 332 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 LIPNQ5VXI9 398 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 MRPL21Q7Z2W9 205 aaKnown RBP20.89■□□□□ 0.94
VEGFA-209ENST00000425836 BPIFB6Q8NFQ5 453 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 RAB1BQ9H0U4 201 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 TPK1Q9H3S4 243 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 INPP5EQ9NRR6 644 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 PLCXD1Q9NUJ7 323 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 R4GMQ9 66 aa20.89■□□□□ 0.94
VEGFA-209ENST00000425836 C17orf100A8MU93 164 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 FAM20BO75063 409 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 RPP14O95059 124 aaKnown RBP20.89■□□□□ 0.93
VEGFA-209ENST00000425836 TIGD6Q17RP2 521 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 C6orf141Q5SZD1 244 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 OR5AS1Q8N127 324 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 OR8B12Q8NGG6 310 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 PPP1R14AQ96A00 147 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 REEP6Q96HR9 211 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 SIGLEC11Q96RL6 698 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 ZNF184Q99676 751 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-209ENST00000425836 PBOV1Q9GZY1 135 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 CYSLTR2Q9NS75 346 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 ERVK13-1Q9NX77 482 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 GNG8Q9UK08 70 aa20.89■□□□□ 0.93
VEGFA-209ENST00000425836 USF3Q68DE3 2245 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 ANKRD17O75179 2603 aaKnown RBP20.88■□□□□ 0.93
VEGFA-209ENST00000425836 PLSCR5A0PG75 271 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 IRGMA1A4Y4 181 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 ZSCAN5BA6NJL1 495 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 SELEP16581 610 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 DCKP27707 260 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 LIPAP38571 399 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 ZNF81P51508 661 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 EFNA4P52798 201 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 OR12D2P58182 307 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 KCTD20Q7Z5Y7 419 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 ALG8Q9BVK2 526 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 JAM3Q9BX67 310 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 MSL2Q9HCI7 577 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 CGGBP1Q9UFW8 167 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-209ENST00000425836 PSORS1C1Q9UIG5 152 aa20.88■□□□□ 0.93
VEGFA-209ENST00000425836 IQCF6A8MYZ5 107 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 F12P00748 615 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-209ENST00000425836 MT-ND5P03915 603 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 GFOD2Q3B7J2 385 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 Q6ZR03 302 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 RORBQ92753 470 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 RASSF4Q9H2L5 321 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 RGCCQ9H4X1 137 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 OPA3Q9H6K4 179 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 G6PC2Q9NQR9 355 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 ACOXLQ9NUZ1 547 aa20.87■□□□□ 0.93
VEGFA-209ENST00000425836 NUFIP1Q9UHK0 495 aaKnown RBP20.87■□□□□ 0.93
VEGFA-209ENST00000425836 EFCAB10A6NFE3 127 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 CD300LBA8K4G0 201 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 LOC110117498-PIK3R3F6TDL0 507 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 LILRA1O75019 489 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 TACSTD2P09758 323 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 PIPP12273 146 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 ACTA2P62736 377 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 ACTG2P63267 376 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 FAM3AP98173 230 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 FAM220AQ7Z4H9 259 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 KRTAP1-3Q8IUG1 177 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 BHLHE23Q8NDY6 225 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 OR8G5Q8NG78 346 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 RNF166Q96A37 237 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 MRPL48Q96GC5 212 aaKnown RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 LYZL4Q96KX0 146 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms