RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 COL6A3P12111 3177 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 LOC101059948A0A1B0GTJ6 334 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 MPGP29372 298 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 C17orf67Q0P5P2 114 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 PTCRAQ6ISU1 281 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 WDR74Q6RFH5 385 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 OVCH2Q7RTZ1 564 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 BVESQ8NE79 360 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 THRSPQ92748 146 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 MED29Q9NX70 200 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 GPN3Q9UHW5 284 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 GLS2Q9UI32 602 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 WASF3Q9UPY6 502 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 MRPS18BQ9Y676 258 aaKnown RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 TRBV11-1A0A0K0K1C0 115 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 CCSO14618 274 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 DXOO77932 396 aaKnown RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 POU3F1Q03052 451 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 TLE3Q04726 772 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 GK2Q14410 553 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-205ENST00000425443 PLPP5Q8NEB5 264 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 OR1J4Q8NGS1 313 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 CMBLQ96DG6 245 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 PDCD10Q9BUL8 212 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 SPACA1Q9HBV2 294 aa11.59□□□□□ -0.55
COL12A1-205ENST00000425443 TMEM235A6NFC5 223 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 WIPF3A6NGB9 483 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 SCRG1O75711 98 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 AMY2AP04746 511 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 CSF1P09603 554 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 CALCRP30988 508 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 HOXC12P31275 282 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 DNASE1L1P49184 302 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 FAM69BQ5VUD6 431 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 FAM166AQ6J272 317 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 PAPD4Q6PIY7 484 aaKnown RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 MISPQ8IVT2 679 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 GABRG1Q8N1C3 465 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 CHST4Q8NCG5 386 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 RNASE11Q8TAA1 199 aaKnown RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 FBXO17Q96EF6 278 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 MRPS24Q96EL2 167 aaKnown RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 NEU1Q99519 415 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 DUSP15Q9H1R2 295 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 PHF3Q92576 2039 aaKnown RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 HSPB2A8KAH6 182 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 ABCD4O14678 606 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 KCNAB3O43448 404 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 AKAIN1P0CW23 69 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 SPP1P10451 314 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 EMP2P54851 167 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 HSPB2Q16082 182 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 RHBDD2Q6NTF9 364 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 DNM1P34Q6PK57 102 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 OR13C3Q8NGS6 347 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF519Q8TB69 540 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 SEC22AQ96IW7 307 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 LRP12Q9Y561 859 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 VSTM2BA6NLU5 285 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 ITGB2P05107 769 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 OR4E1P0C645 316 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-205ENST00000425443 C1orf185Q5T7R7 199 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 TMEM71Q6P5X7 295 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 OR1M1Q8NGA1 313 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 OR5M9Q8NGP3 310 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 OR1J2Q8NGS2 313 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 RNF128Q8TEB7 428 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 GPX8Q8TED1 209 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 DNASE2BQ8WZ79 361 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 MFFQ9GZY8 342 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 RARRES3Q9UL19 164 aa11.58□□□□□ -0.56
COL12A1-205ENST00000425443 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 FER1L5A0AVI2 2057 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 CPAMD8Q8IZJ3 1885 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 HPP00738 406 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF41P51814 821 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-205ENST00000425443 GLT8D1Q68CQ7 371 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 DCXRQ7Z4W1 244 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 ANKRD37Q7Z713 158 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 COMMD2Q86X83 199 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 SLC38A9Q8NBW4 561 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 OR10H5Q8NGA6 315 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 C8orf44Q96CB5 159 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 DDIT4LQ96D03 193 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 METTL7AQ9H8H3 244 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 MED9Q9NWA0 146 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 PPP4R1LQ9P1A2 415 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 CEP192Q8TEP8 1941 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 IGLV1-36A0A0B4J1U3 117 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms