RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR14K1Q8NGZ2 314 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 ENKURQ8TC29 256 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 SMIM4Q8WVI0 70 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 WNT5BQ9H1J7 359 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 TMEM138Q9NPI0 162 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 TMEM272A0A1B0GTI8 110 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 SLC22A20A6NK97 555 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 ZNF587BE7ETH6 402 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 RAB3AP20336 220 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 FREM1Q5H8C1 2179 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 OR52N4Q8NGI2 321 aa23.19■■□□□ 1.3
LDB1-202ENST00000425280 FOXRED1Q96CU9 486 aaPredicted RBP23.19■■□□□ 1.3
LDB1-202ENST00000425280 ZC3HAV1LQ96H79 300 aaKnown RBP23.19■■□□□ 1.3
LDB1-202ENST00000425280 WISP2O76076 250 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 FARS2O95363 451 aaKnown RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 NHLH1Q02575 133 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 RSPO4Q2I0M5 234 aaPredicted RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 KRTAP27-1Q3LI81 207 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 SFRP5Q5T4F7 317 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 MTFR2Q6P444 385 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 AUNIPQ9H7T9 357 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 ZNF175Q9Y473 711 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 TNRC6AQ8NDV7 1962 aaKnown RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 AKAP13Q12802 2813 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 SULT1B1O43704 296 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 MMP7P09237 267 aaPredicted RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 FAM157BP0CG42 384 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 SPINK2P20155 84 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 MNDAP41218 407 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 SRP9P49458 86 aaKnown RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 FOXG1P55316 489 aaPredicted RBP23.18■■□□□ 1.3
LDB1-202ENST00000425280 GPR176Q14439 515 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 ANKRD16Q6P6B7 361 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 DRAM2Q6UX65 266 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 BIVMQ86UB2 503 aa23.18■■□□□ 1.3
LDB1-202ENST00000425280 CTAG2O75638 210 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 ARSBP15848 533 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 TPTEP56180 551 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 TAS2R20P59543 309 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 HGFACQ04756 655 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 FOXC1Q12948 553 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 C9orf135Q5VTT2 229 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 ZADH2Q8N4Q0 377 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 OR4D6Q8NGJ1 314 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 GCDHQ92947 438 aaPredicted RBP23.17■■□□□ 1.3
LDB1-202ENST00000425280 SORCS2Q96PQ0 1159 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 PRDM14Q9GZV8 571 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 UPB1Q9UBR1 384 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 RTTNQ86VV8 2226 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 HNRNPCP07910 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
LDB1-202ENST00000425280 HTR5AP47898 357 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 SNAI3Q3KNW1 292 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 PGAP1Q75T13 922 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 ZNF100Q8IYN0 542 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 CNTD2Q9H8S5 307 aa23.17■■□□□ 1.3
LDB1-202ENST00000425280 XRCC3O43542 346 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 IGFL3Q6UXB1 125 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 ZNF627Q7L945 461 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 KRT74Q7RTS7 529 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 GLCCI1Q86VQ1 547 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 DUSP18Q8NEJ0 188 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 OR10A2Q9H208 303 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 PLEKHA1Q9HB21 404 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 ZNF224Q9NZL3 707 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 V9GYS6 101 aa23.16■■□□□ 1.3
LDB1-202ENST00000425280 AGTR1P30556 359 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 CARTPTQ16568 116 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 Q6ZSR3 168 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 OR5AS1Q8N127 324 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 OR52H1Q8NGJ2 320 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 METTL17Q9H7H0 456 aaPredicted RBP23.15■■□□□ 1.3
LDB1-202ENST00000425280 FAM240BA0A1B0GVZ2 78 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 GABARAPH6UMI1 98 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 LDLRAD4O15165 306 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 TPPPO94811 219 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 TOMM5Q8N4H5 51 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 OR52I2Q8NH67 350 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 CACNG2Q9Y698 323 aa23.15■■□□□ 1.3
LDB1-202ENST00000425280 DHRS3O75911 302 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 ERCC1P07992 297 aaPredicted RBP23.14■■□□□ 1.29
LDB1-202ENST00000425280 PTHLHP12272 177 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 FCGR2AP12318 317 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 FAPQ12884 760 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 ZNF169Q14929 603 aaPredicted RBP23.14■■□□□ 1.29
LDB1-202ENST00000425280 ADGRE4PQ86SQ3 457 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 SIAH3Q8IW03 269 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 SGK3Q96BR1 496 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 UQCC2Q9BRT2 126 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 GP6Q9HCN6 339 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 NLKQ9UBE8 527 aa23.14■■□□□ 1.29
LDB1-202ENST00000425280 A0A096LPE4 126 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 A0A1W2PPZ6 126 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 CIB4A0PJX0 185 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 AQP7O14520 342 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 ORC5O43913 435 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 PABPC1L2AQ5JQF8 200 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 SNIP1Q8TAD8 396 aaKnown RBP23.13■■□□□ 1.29
LDB1-202ENST00000425280 C15orf40Q8WUR7 153 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 C12orf49Q9H741 205 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 DIABLOQ9NR28 239 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms