RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF736B4DX44 427 aaPredicted RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 SRSF10O75494 262 aaKnown RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 FSTP19883 344 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 CFPP27918 469 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 SORDQ00796 357 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 MYBPHQ13203 477 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 MFSD13AQ14CX5 517 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 C6orf15Q6UXA7 325 aaPredicted RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 NFAM1Q8NET5 270 aaPredicted RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 PNPLA2Q96AD5 504 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 SLAMF6Q96DU3 332 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 RTTNQ86VV8 2226 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 CCDC187A0A096LP49 1063 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 MEGF11A6BM72 1044 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 LIPT2A6NK58 231 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 TEX46H3BTG2 121 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 SYT7O43581 403 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 OR2J2O76002 312 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 ACSM4P0C7M7 580 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 NBL1P41271 181 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 FOLR3P41439 243 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 AANATQ16613 207 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 TMEM244Q5VVB8 128 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 PIP4P1Q86T03 277 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 PRRX2Q99811 253 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 CNTD2Q9H8S5 307 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 SERINC1Q9NRX5 453 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 KLK13Q9UKR3 277 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 EFNA2O43921 213 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 UBCP0CG48 685 aaKnown RBP9.47□□□□□ -0.89
CUX1-205ENST00000425244 SLC2A1P11166 492 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 CDAP32320 146 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 SFTPDP35247 375 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 PRKXP51817 358 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 CLRN1P58418 232 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 DHODHQ02127 395 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 HLXQ14774 488 aaPredicted RBP9.47□□□□□ -0.89
CUX1-205ENST00000425244 CDCP2Q5VXM1 449 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 ZNF584Q8IVC4 421 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 BPIFB2Q8N4F0 458 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 OR52N4Q8NGI2 321 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 OR1J2Q8NGS2 313 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 OR13C9Q8NGT0 318 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 CT55Q8WUE5 264 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 LIN37Q96GY3 246 aaPredicted RBP9.47□□□□□ -0.89
CUX1-205ENST00000425244 SPACA5Q96QH8 159 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 SLC26A1Q9H2B4 701 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 PTGES2Q9H7Z7 377 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 ALKBH4Q9NXW9 302 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 UPB1Q9UBR1 384 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 C19orf25Q9UFG5 118 aaPredicted RBP9.47□□□□□ -0.89
CUX1-205ENST00000425244 MGAQ8IWI9 3026 aa9.47□□□□□ -0.89
CUX1-205ENST00000425244 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 LRP3O75074 770 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 RP2O75695 350 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 OR4E1P0C645 316 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 GABRA1P14867 456 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 BDKRB2P30411 391 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 S100A11P31949 105 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 ZP4Q12836 540 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 GFOD2Q3B7J2 385 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 CDNFQ49AH0 187 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 TMEM229BQ8NBD8 167 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 OR2Y1Q8NGV0 311 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 NUBPLQ8TB37 319 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 CCDC107Q8WV48 283 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 RNF133Q8WVZ7 376 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 ADAT3Q96EY9 351 aaPredicted RBP9.46□□□□□ -0.89
CUX1-205ENST00000425244 OR5B2Q96R09 309 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 PBOV1Q9GZY1 135 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 ZNF160Q9HCG1 818 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 GDF2Q9UK05 429 aaPredicted RBP9.46□□□□□ -0.89
CUX1-205ENST00000425244 HS3ST3B1Q9Y662 390 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 AUP1Q9Y679 476 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.89
CUX1-205ENST00000425244 METTL21EPA6NDL7 271 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 AQP8O94778 261 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TTRP02766 147 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 ISG15P05161 165 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 RRASP10301 218 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TOMM20Q15388 145 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TAF13Q15543 124 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TMEM65Q6PI78 240 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 FJX1Q86VR8 437 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 UEVLDQ8IX04 471 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 C12orf45Q8N5I9 185 aaPredicted RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 FBXW5Q969U6 566 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TMPRSS13Q9BYE2 586 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 WDR54Q9H977 334 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 SDHAF3Q9NRP4 125 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms