RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CXorf40AQ8TE69 158 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BHQ93079 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 MCHR2Q969V1 340 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 NTNG2Q96CW9 530 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BNQ99877 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 HIST1H2BMQ99879 126 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 NICN1Q9BSH3 213 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF426Q9BUY5 554 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 PDE7BQ9NP56 450 aa10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 GDF2Q9UK05 429 aaPredicted RBP10.1□□□□□ -0.79
SEC61A1-202ENST00000424880 ZNF705GA8MUZ8 300 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 RPL36A-HNRNPH2H7BZ11 118 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 EREGO14944 169 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MPZL1O95297 269 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 DUS4LO95620 317 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 HCKP08631 526 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 EN2P19622 333 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 GLRA1P23415 457 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC7A9P82251 487 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 DMWDQ09019 674 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SPEM2Q0P670 501 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 RUNX2Q13950 521 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MFSD8Q8NHS3 518 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 RPS4Y2Q8TD47 263 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 RNF128Q8TEB7 428 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 LCN9Q8WX39 176 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 ERGIC1Q969X5 290 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 OR5B2Q96R09 309 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 KCNJ16Q9NPI9 418 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 FBXL17Q9UF56 701 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MRPS2Q9Y399 296 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 TSTD3H0UI37 97 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 FGF17O60258 216 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 IGKV1D-16P01601 117 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SPARCP09486 303 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 HKR1P10072 659 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 CRABP1P29762 137 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 PPP1CCP36873 323 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC26A5P58743 744 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 ERVFRD-1P60508 538 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC35D3Q5M8T2 416 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 Q8WTZ3 238 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 CDCA3Q99618 268 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 LPAR4Q99677 370 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 PRRT1Q99946 306 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 TPSD1Q9BZJ3 242 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MKKSQ9NPJ1 570 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 DHDHQ9UQ10 334 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC5A6Q9Y289 635 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 TRBV5-7A0A0A0MS05 114 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 SLC33A1O00400 549 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 EIF1AYO14602 144 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MMP7P09237 267 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 GIMD1P0DJR0 217 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 CLDN6P56747 220 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 TMEM33P57088 247 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 PPA1Q15181 289 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 HEPN1Q6WQI6 88 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 COX15Q7KZN9 410 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 TCEAL8Q8IYN2 117 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 MRGPRX3Q96LB0 322 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 NUDT9Q9BW91 350 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 C5orf66Q9H5L9 145 aa10.09□□□□□ -0.79
SEC61A1-202ENST00000424880 PRUNE2Q8WUY3 3088 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TRA2BP62995 288 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 PTPRSQ13332 1948 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 LRRK1Q38SD2 2015 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 OR2T2Q6IF00 324 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 ALKBH2Q6NS38 261 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC16A9Q7RTY1 509 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 OR9K2Q8NGE7 335 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 ARRDC3Q96B67 414 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 YPEL4Q96NS1 127 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TRBV6-7A0A0A0MS04 114 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 A0A1W2PP11 408 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 FAM221BA6H8Z2 402 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 MARCH11A6NNE9 402 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 H0YL77 283 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 K7EQS6 105 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 IFNL4K9M1U5 179 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 PPP1R2P9O14990 202 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 CCL16O15467 120 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 P2RX6O15547 441 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TNFSF12O43508 249 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 XRCC2O43543 280 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 CSTBP04080 98 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 THBS1P07996 1170 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TACR3P29371 465 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 EIF1AXP47813 144 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC6A9P48067 706 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 SSBP1Q04837 148 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 BIKQ13323 160 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 OR52E1Q8NGJ3 308 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 OR4C3Q8NH37 302 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM230Q96A57 120 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF524Q96C55 264 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms