RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 ST3GAL4Q11206 333 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 RAB40BQ12829 278 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 TMED1Q13445 227 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 EIF2B1Q14232 305 aaKnown RBP8.28□□□□□ -1.08
HERC3-204ENST00000422770 SLC18B1Q6NT16 456 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 DCXRQ7Z4W1 244 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 OR5AS1Q8N127 324 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 SVOPQ8N4V2 548 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 TSPAN14Q8NG11 270 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 OR5L1Q8NGL2 311 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 TEAD3Q99594 435 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 COQ7Q99807 217 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 YTHDF1Q9BYJ9 559 aaKnown RBP8.28□□□□□ -1.08
HERC3-204ENST00000422770 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 VCX3AQ9NNX9 186 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 MYOZ1Q9NP98 299 aaPredicted RBP8.28□□□□□ -1.08
HERC3-204ENST00000422770 DLL4Q9NR61 685 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 FKBP14Q9NWM8 211 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 KCNG2Q9UJ96 466 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 DIMT1Q9UNQ2 313 aaKnown RBP8.28□□□□□ -1.08
HERC3-204ENST00000422770 KLHDC2Q9Y2U9 406 aa8.28□□□□□ -1.08
HERC3-204ENST00000422770 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
HERC3-204ENST00000422770 A0A087WXM4 84 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 LOC390937A0A1W2PQ73 354 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 DAPL1A0PJW8 107 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 HSD11B1P28845 292 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 MAGEB1P43366 347 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 RGS6P49758 472 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 BLVRAP53004 296 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 TPTEP56180 551 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 PRSS12P56730 875 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 CSNK2BP67870 215 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 MVKQ03426 396 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 ECH1Q13011 328 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 HLXQ14774 488 aaPredicted RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 NEDD8Q15843 81 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 KLHL22Q53GT1 634 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 SLC16A9Q7RTY1 509 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 FAM220AQ7Z4H9 259 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 TIGD4Q8IY51 512 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 ZNF283Q8N7M2 679 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 BHLHE23Q8NDY6 225 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 C10orf105Q8TEF2 133 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 APOBEC3DQ96AK3 386 aaPredicted RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 CMBLQ96DG6 245 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 MARS2Q96GW9 593 aaKnown RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 TMEM80Q96HE8 168 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 COG8Q96MW5 612 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 ALG8Q9BVK2 526 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 MRPS26Q9BYN8 205 aaKnown RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 NARFLQ9H6Q4 476 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 MSL2Q9HCI7 577 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 FGF20Q9NP95 211 aaPredicted RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 TBCCD1Q9NVR7 557 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 CHCHD3Q9NX63 227 aaKnown RBP8.27□□□□□ -1.09
HERC3-204ENST00000422770 CYB5R1Q9UHQ9 305 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 ATPIF1Q9UII2 106 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 SCOCQ9UIL1 159 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 LAMP5Q9UJQ1 280 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 IKZF2Q9UKS7 526 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 COPS3Q9UNS2 423 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 STARD10Q9Y365 291 aa8.27□□□□□ -1.09
HERC3-204ENST00000422770 SETD2Q9BYW2 2564 aaPredicted RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 TANC2Q9HCD6 1990 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 IGLV3-9A0A075B6K5 115 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 C17orf100A8MU93 164 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 M0R135 149 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 TBX1O43435 398 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 NCR1O76036 304 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 IGHV3-13P01766 116 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 IGHA1P01876 353 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 HPXP02790 462 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 USF1P22415 310 aaPredicted RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 PSMB9P28065 219 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 C21orf33P30042 268 aaPredicted RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 ETV1P50549 477 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 PRKXP51817 358 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 HCCSP53701 268 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 HIST1H3AP68431 136 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 MALLQ13021 153 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 TBCEQ15813 527 aaPredicted RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 KRTAP21-3Q3LHN1 58 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 ZMAT1Q5H9K5 638 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 HIST2H3PS2Q5TEC6 136 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 MBNL2Q5VZF2 373 aaKnown RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 HIST2H3AQ71DI3 136 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 SSX6Q7RTT6 188 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 PRSS48Q7RTY5 328 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 MRPL21Q7Z2W9 205 aaKnown RBP8.26□□□□□ -1.09
HERC3-204ENST00000422770 DPY19L4Q7Z388 723 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 ACBD7Q8N6N7 88 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 THEM6Q8WUY1 208 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 SLAMF6Q96DU3 332 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 ZNF799Q96GE5 643 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 MAP6Q96JE9 813 aa8.26□□□□□ -1.09
HERC3-204ENST00000422770 DCLRE1CQ96SD1 692 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms