RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 GPR84Q9NQS5 396 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CGGBP1Q9UFW8 167 aaPredicted RBP12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SDK2Q58EX2 2172 aa12.84□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TERTO14746 1132 aaKnown RBP12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 DHRS3O75911 302 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CDAP32320 146 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 QRFPP83859 136 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 FOXK1P85037 733 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 AIMP2Q13155 320 aaKnown RBP12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ENDOGQ14249 297 aaKnown RBP12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 MPPED2Q15777 294 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF584Q8IVC4 421 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR4D6Q8NGJ1 314 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GINS4Q9BRT9 223 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CST11Q9H112 138 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TMEM9BQ9NQ34 198 aa12.83□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RAB27BO00194 218 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 KDM4BO94953 1096 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 MT-CO3P00414 261 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OPN1LWP04000 364 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 DLSTP36957 453 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 SGCAQ16586 387 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TMEM255AQ5JRV8 349 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF468Q5VIY5 522 aaPredicted RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 MTFR2Q6P444 385 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZIC4Q8N9L1 334 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR13C9Q8NGT0 318 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RELTQ969Z4 430 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 FER1L6-AS2Q96M78 137 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 URM1Q9BTM9 101 aaKnown RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR10A4Q9H209 315 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RGCCQ9H4X1 137 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 NKIRAS2Q9NYR9 191 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 LRFN1Q9P244 771 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PLEKHA6Q9Y2H5 1048 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF716A6NP11 495 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF736B4DX44 427 aaPredicted RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 STMND1H3BQB6 276 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 H3BSH0 61 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 M0R135 149 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CDX4O14627 284 aaPredicted RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CYTIPO60759 359 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF780AO75290 641 aaPredicted RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RAB3DO95716 219 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 WDPCPO95876 746 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 HPNP05981 417 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PRF1P14222 555 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GDF1P27539 372 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 AVPR2P30518 371 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CBX5P45973 191 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PRKXP51817 358 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GFRA1P56159 465 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RPS18P62269 152 aaKnown RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PNLIPRP3Q17RR3 467 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 C9orf62Q8N4C0 152 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR52N4Q8NGI2 321 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 LILRB4Q8NHJ6 448 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF431Q8TF32 576 aaPredicted RBP12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PSMF1Q92530 271 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF799Q96GE5 643 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TMPRSS13Q9BYE2 586 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CHST5Q9GZS9 411 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR10A2Q9H208 303 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 V9GYS6 101 aa12.82□□□□□ -0.36
HLA-DPA1-242ENST00000419277 NCOA6Q14686 2063 aaPredicted RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 IGKV3D-15A0A087WSY6 115 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ITGB2P05107 769 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OC90Q02509 493 aaPredicted RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ZNF260Q3ZCT1 412 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 FAHD2BQ6P2I3 314 aaPredicted RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 Q6ZTK2 550 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR56B1Q8NGI3 324 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR14K1Q8NGZ2 314 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ADAMTS17Q8TE56 1095 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 SSC4DQ8WTU2 575 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 FAHD2AQ96GK7 314 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 THOC3Q96J01 351 aaKnown RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TECTBQ96PL2 329 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 UCN2Q96RP3 112 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RNF122Q9H9V4 155 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PLEK2Q9NYT0 353 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 MRPL15Q9P015 296 aaKnown RBP12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 HSPB11Q9Y547 144 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
HLA-DPA1-242ENST00000419277 OR2A4O95047 310 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms