RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 SMARCB1Q12824 385 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 NAB1Q13506 487 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 TRAM1Q15629 374 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 SRSF7Q16629 238 aaKnown RBP eCLIP3.41□□□□□ -1.862e-6■■■■□ 21.1
RFC4-205ENST00000418288 MICAQ29983 383 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 ZNF658BQ4V348 819 aaPredicted RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 SLC35E4Q6ICL7 350 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 DNM1P34Q6PK57 102 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 CRIP3Q6Q6R5 217 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 Q6ZN92 141 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 ZNF771Q7L3S4 317 aaPredicted RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 BBS7Q8IWZ6 715 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 C10orf67Q8IYJ2 551 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 BLIDQ8IZY5 108 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 ZFP82Q8N141 532 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 STPG2Q8N412 459 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 SPICQ8N5J4 248 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 ATPAF2Q8N5M1 289 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 BLOC1S5Q8TDH9 187 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 NEUROG1Q92886 237 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 RCN3Q96D15 328 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 C18orf12Q96KH6 178 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 APOL4Q9BPW4 351 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 WACQ9BTA9 647 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 C1QTNF4Q9BXJ3 329 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 SELENOIQ9C0D9 397 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 DSN1Q9H410 356 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 PRORYQ9H606 182 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 MRPL40Q9NQ50 206 aaKnown RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 EXD2Q9NVH0 621 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 DDIT4Q9NX09 232 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 PYGO1Q9Y3Y4 419 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 V9GY05 133 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 RTEL1-TNFRSF6BF6WH68 1400 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 BLMP54132 1417 aaPredicted RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 PRG4Q92954 1404 aaPredicted RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 TRIP12Q14669 1992 aaPredicted RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 TTC37Q6PGP7 1564 aa3.41□□□□□ -1.86
RFC4-205ENST00000418288 TARBP1Q13395 1621 aaKnown RBP3.41□□□□□ -1.86
RFC4-205ENST00000418288 TOPBP1Q92547 1522 aa3.4□□□□□ -1.86
RFC4-205ENST00000418288 CACNA1FO60840 1977 aa3.4□□□□□ -1.86
RFC4-205ENST00000418288 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 IGHV2OR16-5A0A0B4J2B6 119 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 A6NIZ1 184 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 F5H5T6 163 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 M0R036 132 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 NTN3O00634 580 aaPredicted RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 PHF1O43189 567 aaPredicted RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 DENRO43583 198 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 AIFM1O95831 613 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 CDK1P06493 297 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 FABP1P07148 127 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 CTSLP07711 333 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 OR4E1P0C645 316 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 THRAP10827 490 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 LAMP1P11279 417 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 ATF6P18850 670 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 HRH1P35367 487 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 SERPINB5P36952 375 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 ARPC4P59998 168 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 RAP1BP61224 184 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 PPP1CBP62140 327 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 SRSF4Q08170 494 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 C2orf54Q08AI8 447 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 FCHO2Q0JRZ9 810 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 CLINT1Q14677 625 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 LTB4RQ15722 352 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 RFX4Q33E94 735 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 FAM135BQ49AJ0 1406 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 C19orf48Q6RUI8 117 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 CXCL17Q6UXB2 119 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 AQP11Q8NBQ7 271 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 NUP37Q8NFH4 326 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 OR52E2Q8NGJ4 325 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 APH1BQ8WW43 257 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 RPL36ALQ969Q0 106 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 FGGYQ96C11 551 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 CCDC42Q96M95 316 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 RNF145Q96MT1 663 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 TMEM56Q96MV1 263 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 RIOK2Q9BVS4 552 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 MFSD1Q9H3U5 465 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 DHX35Q9H5Z1 703 aaKnown RBP3.4□□□□□ -1.87
RFC4-205ENST00000418288 UGT1A7Q9HAW7 530 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 UGT1A8Q9HAW9 530 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 KCNJ16Q9NPI9 418 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 NDE1Q9NXR1 346 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 GUCA1BQ9UMX6 200 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 ZNF257Q9Y2Q1 563 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 TIMM22Q9Y584 194 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 SHROOM2Q13796 1616 aa3.4□□□□□ -1.87
RFC4-205ENST00000418288 PDE4DIPQ5VU43 2346 aa3.39□□□□□ -1.87
RFC4-205ENST00000418288 RAB3GAP2Q9H2M9 1393 aa3.39□□□□□ -1.87
RFC4-205ENST00000418288 EP400Q96L91 3159 aa3.39□□□□□ -1.87
RFC4-205ENST00000418288 NWD1Q149M9 1564 aa3.39□□□□□ -1.87
RFC4-205ENST00000418288 C21orf140B9A014 251 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms