RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 KCTD18Q6PI47 426 aaPredicted RBP10.63□□□□□ -0.71
SKA1-203ENST00000417656 ZNF322Q6U7Q0 402 aaPredicted RBP10.63□□□□□ -0.71
SKA1-203ENST00000417656 Q6ZR03 302 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 USP51Q70EK9 711 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 PGAP1Q75T13 922 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 BHLHE23Q8NDY6 225 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 OR10H4Q8NGA5 316 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 RHOXF1Q8NHV9 184 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 MNTQ99583 582 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 CYSLTR2Q9NS75 346 aa10.63□□□□□ -0.71
SKA1-203ENST00000417656 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 A0A1W2PQL4 384 aaPredicted RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 IQCF6A8MYZ5 107 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 XRCC2O43543 280 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 APOC1P02654 83 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 CSF3P09919 207 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 DBTP11182 482 aaKnown RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 CAPGP40121 348 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 PDLIM4P50479 330 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 ADARB1P78563 741 aaKnown RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 CCL8P80075 99 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 TIGD6Q17RP2 521 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 ZNF679Q8IYX0 411 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 CIARTQ8N365 385 aaPredicted RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 DHRSXQ8N5I4 330 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 OR8B12Q8NGG6 310 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 CNIH3Q8TBE1 160 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 C10orf105Q8TEF2 133 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 FAM168AQ92567 244 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 PGAM5Q96HS1 289 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 MROQ9BYG7 248 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 OR10A2Q9H208 303 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 NIPAL2Q9H841 368 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 MYOZ1Q9NP98 299 aaPredicted RBP10.62□□□□□ -0.71
SKA1-203ENST00000417656 FAM206AQ9NX38 181 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 TANC2Q9HCD6 1990 aa10.62□□□□□ -0.71
SKA1-203ENST00000417656 F8P00451 2351 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SNTNA6NMZ2 147 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SMAD7O15105 426 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 ZNF254O75437 659 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 WBP4O75554 376 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 GNAO1P09471 354 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR2T7P0C7T2 308 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 CD99P14209 185 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SELEP16581 610 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 LIPAP38571 399 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 RIDAP52758 137 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 AQP4P55087 323 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 DSCR9P59020 149 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 ZNF85Q03923 595 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 EGR3Q06889 387 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SMN1Q16637 294 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 ZNF829Q3KNS6 432 aaPredicted RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 SPRNQ5BIV9 151 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 DEGS2Q6QHC5 323 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SETD9Q8NE22 299 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR8G5Q8NG78 346 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR10AD1Q8NGE0 317 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR56B2PQ8NGI1 322 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 OR2T27Q8NH04 317 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 YIPF5Q969M3 257 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 LGALS12Q96DT0 336 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 ELMOD3Q96FG2 381 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 REEP6Q96HR9 211 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 COX4I2Q96KJ9 171 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 Q96MT0 163 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 RHNO1Q9BSD3 238 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SP140LQ9H930 580 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 SAP30LQ9HAJ7 183 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 DLL4Q9NR61 685 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 NKIRAS2Q9NYR9 191 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 MRM2Q9UI43 246 aaKnown RBP10.61□□□□□ -0.71
SKA1-203ENST00000417656 CR1P17927 2039 aa10.61□□□□□ -0.71
SKA1-203ENST00000417656 HIVEP1P15822 2718 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 hCG_38984A0A1B0GV85 526 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 CD300LBA8K4G0 201 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 CDC14BO60729 498 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 SRSF10O75494 262 aaKnown RBP10.6□□□□□ -0.71
SKA1-203ENST00000417656 ATP6V1G2O95670 118 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 KRT8P05787 483 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 ADH4P08319 380 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 ACTC1P68032 377 aa10.6□□□□□ -0.71
SKA1-203ENST00000417656 ACTA1P68133 377 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms