RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SMARCD1Q96GM5 515 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF641Q96N77 438 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FOPNLQ96NB1 174 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PSKH2Q96QS6 385 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SELENOSQ9BQE4 189 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CALN1Q9BXU9 219 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FRMD8P1Q9BZ68 369 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 DNTTIP1Q9H147 329 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 VCX2Q9H322 139 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 DHX35Q9H5Z1 703 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZFP14Q9HCL3 533 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TM9SF3Q9HD45 589 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 POLE4Q9NR33 117 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CTPS2Q9NRF8 586 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CYTL1Q9NRR1 136 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RGS18Q9NS28 235 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 IL37Q9NZH6 218 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 MMP17Q9ULZ9 603 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PIGLQ9Y2B2 252 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RRP15Q9Y3B9 282 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 HEBP2Q9Y5Z4 205 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 BPTFQ12830 3046 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HACD1B0YJ81 288 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 TIMM8AO60220 97 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HUS1O60921 280 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 CDH16O75309 829 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR7A10O76100 309 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 IL1BP01584 269 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 APOEP02649 317 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ALDOBP05062 364 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HLA-DQB2P05538 268 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZDHHC11BP0C7U3 371 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SMIM10L1P0DMW3 83 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 TCN1P20061 433 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 OMGP23515 440 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 VHLP40337 213 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SSR1P43307 286 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HCAR3P49019 387 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF136P52737 540 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ARFIP1P53367 373 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC18A1P54219 525 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 NCALDP61601 193 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 CRADDP78560 199 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 REG3AQ06141 175 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 XRCC4Q13426 336 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 EIF4EBP1Q13541 118 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 TFDP2Q14188 446 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF77Q15935 545 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 GUCA2BQ16661 112 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HADHQ16836 314 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ANKDD1AQ495B1 522 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 KCTD21Q4G0X4 260 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 HSP90B2PQ58FF3 399 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SDHAF4Q5VUM1 108 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 KDELC1Q6UW63 502 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 EFL1Q7Z2Z2 1120 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM150AQ86TG1 271 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 PSTKQ8IV42 348 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF567Q8N184 647 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 C4orf33Q8N1A6 199 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 BBOF1Q8ND07 529 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 CCDC54Q8NEL0 328 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 CD300LFQ8TDQ1 290 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 EXOSC8Q96B26 276 aaKnown RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 AURKBQ96GD4 344 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SMIM10Q96HG1 83 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 PKNOX2Q96KN3 472 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 KLF6Q99612 283 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ACBD6Q9BR61 282 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC39A3Q9BRY0 314 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 ROPN1BQ9BZX4 212 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 PPA2Q9H2U2 334 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 CWH43Q9H720 699 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 NMRAL1Q9HBL8 299 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 FGFR1OP2Q9NVK5 253 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC17A7Q9P2U7 560 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 PSMC3IPQ9P2W1 217 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 GGA2Q9UJY4 613 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 BRCA2P51587 3418 aa2.25□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGKV2-28A0A075B6P5 120 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 EXOC1LA0A1B0GW35 172 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 A0A1W2PPE3 182 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 PLAC8L1A1L4L8 177 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 GMNCA6NCL1 334 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM47DPA6NHR8 397 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 TCP11X1B4DZS4 312 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 H3BNH8 94 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 H7C0C1 242 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 GOLGA8RI6L899 631 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 M0QZ92 97 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 KCNK1O00180 336 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 NDUFAB1O14561 156 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 AIREO43918 545 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 MGRN1O60291 552 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 DFNA5O60443 496 aa2.24□□□□□ -2.05
HMGB1P11-201ENST00000413899 EDF1O60869 148 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms